:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-deformats' .. highlight: bash bioconductor-deformats ====================== .. conda:recipe:: bioconductor-deformats :replaces_section_title: :noindex: Differential gene expression data formats converter :homepage: https://bioconductor.org/packages/3.14/bioc/html/DEFormats.html :license: GPL-3 :recipe: /`bioconductor-deformats `_/`meta.yaml `_ :links: biotools: :biotools:`deformats`, doi: :doi:`10.1038/nmeth.3252` Convert between different data formats used by differential gene expression analysis tools. .. conda:package:: bioconductor-deformats |downloads_bioconductor-deformats| |docker_bioconductor-deformats| :versions: .. raw:: html
1.22.0-01.20.0-01.18.0-11.18.0-01.16.0-01.14.0-01.12.0-11.10.0-01.8.0-0 ``1.22.0-0``,  ``1.20.0-0``,  ``1.18.0-1``,  ``1.18.0-0``,  ``1.16.0-0``,  ``1.14.0-0``,  ``1.12.0-1``,  ``1.10.0-0``,  ``1.8.0-0``,  ``1.6.1-0`` .. raw:: html
:depends bioconductor-deseq2: ``>=1.34.0,<1.35.0`` :depends bioconductor-edger: ``>=3.36.0,<3.37.0`` :depends bioconductor-genomicranges: ``>=1.46.0,<1.47.0`` :depends bioconductor-s4vectors: ``>=0.32.0,<0.33.0`` :depends bioconductor-summarizedexperiment: ``>=1.24.0,<1.25.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-checkmate: :depends r-data.table: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-deformats and update with:: conda update bioconductor-deformats or use the docker container:: docker pull quay.io/biocontainers/bioconductor-deformats: (see `bioconductor-deformats/tags`_ for valid values for ````) .. |downloads_bioconductor-deformats| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-deformats.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-deformats :alt: (downloads) .. |docker_bioconductor-deformats| image:: https://quay.io/repository/biocontainers/bioconductor-deformats/status :target: https://quay.io/repository/biocontainers/bioconductor-deformats .. _`bioconductor-deformats/tags`: https://quay.io/repository/biocontainers/bioconductor-deformats?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-deformats/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-deformats/README.html