:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-easyreporting' .. highlight: bash bioconductor-easyreporting ========================== .. conda:recipe:: bioconductor-easyreporting :replaces_section_title: :noindex: Helps creating report for improving Reproducible Computational Research :homepage: https://bioconductor.org/packages/3.18/bioc/html/easyreporting.html :license: Artistic-2.0 :recipe: /`bioconductor-easyreporting `_/`meta.yaml `_ An S4 class for facilitating the automated creation of rmarkdown files inside other packages\/software even without knowing rmarkdown language. Best if implemented in functions as \"recursive\" style programming. .. conda:package:: bioconductor-easyreporting |downloads_bioconductor-easyreporting| |docker_bioconductor-easyreporting| :versions: ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.0-1``,  ``1.2.0-0``,  ``1.0.0-0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-rlang: :depends r-rmarkdown: :depends r-shiny: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-easyreporting and update with:: mamba update bioconductor-easyreporting To create a new environment, run:: mamba create --name myenvname bioconductor-easyreporting with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-easyreporting: (see `bioconductor-easyreporting/tags`_ for valid values for ````) .. |downloads_bioconductor-easyreporting| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-easyreporting.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-easyreporting :alt: (downloads) .. |docker_bioconductor-easyreporting| image:: https://quay.io/repository/biocontainers/bioconductor-easyreporting/status :target: https://quay.io/repository/biocontainers/bioconductor-easyreporting .. _`bioconductor-easyreporting/tags`: https://quay.io/repository/biocontainers/bioconductor-easyreporting?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-easyreporting/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-easyreporting/README.html