:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-factdesign' .. highlight: bash bioconductor-factdesign ======================= .. conda:recipe:: bioconductor-factdesign :replaces_section_title: :noindex: Factorial designed microarray experiment analysis :homepage: https://bioconductor.org/packages/3.18/bioc/html/factDesign.html :license: LGPL :recipe: /`bioconductor-factdesign `_/`meta.yaml `_ This package provides a set of tools for analyzing data from a factorial designed microarray experiment\, or any microarray experiment for which a linear model is appropriate. The functions can be used to evaluate tests of contrast of biological interest and perform single outlier detection. .. conda:package:: bioconductor-factdesign |downloads_bioconductor-factdesign| |docker_bioconductor-factdesign| :versions: .. raw:: html
1.78.0-01.76.0-01.74.0-01.70.0-01.68.0-01.66.0-11.66.0-01.64.0-01.62.0-0 ``1.78.0-0``,  ``1.76.0-0``,  ``1.74.0-0``,  ``1.70.0-0``,  ``1.68.0-0``,  ``1.66.0-1``,  ``1.66.0-0``,  ``1.64.0-0``,  ``1.62.0-0``,  ``1.60.0-1``,  ``1.58.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.62.0,<2.63.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-factdesign and update with:: mamba update bioconductor-factdesign To create a new environment, run:: mamba create --name myenvname bioconductor-factdesign with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-factdesign: (see `bioconductor-factdesign/tags`_ for valid values for ````) .. |downloads_bioconductor-factdesign| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-factdesign.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-factdesign :alt: (downloads) .. |docker_bioconductor-factdesign| image:: https://quay.io/repository/biocontainers/bioconductor-factdesign/status :target: https://quay.io/repository/biocontainers/bioconductor-factdesign .. _`bioconductor-factdesign/tags`: https://quay.io/repository/biocontainers/bioconductor-factdesign?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-factdesign/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-factdesign/README.html