:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-hybridmtest'
.. highlight: bash

bioconductor-hybridmtest
========================

.. conda:recipe:: bioconductor-hybridmtest
   :replaces_section_title:
   :noindex:

   Hybrid Multiple Testing

   :homepage: https://bioconductor.org/packages/3.14/bioc/html/HybridMTest.html
   :license: GPL Version 2 or later
   :recipe: /`bioconductor-hybridmtest <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-hybridmtest>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-hybridmtest/meta.yaml>`_
   :links: biotools: :biotools:`hybridmtest`, doi: :doi:`10.1038/nmeth.3252`

   Performs hybrid multiple testing that incorporates method selection and assumption evaluations into the analysis using empirical Bayes probability \(EBP\) estimates obtained by Grenander density estimation. For instance\, for 3\-group comparison analysis\, Hybrid Multiple testing considers EBPs as weighted EBPs between F\-test and H\-test with EBPs from Shapiro Wilk test of normality as weigth. Instead of just using EBPs from F\-test only or using H\-test only\, this methodology combines both types of EBPs through EBPs from Shapiro Wilk test of normality. This methodology uses then the law of total EBPs.


.. conda:package:: bioconductor-hybridmtest

   |downloads_bioconductor-hybridmtest| |docker_bioconductor-hybridmtest|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>1.38.0-0</code>,  <code>1.36.0-0</code>,  <code>1.34.0-1</code>,  <code>1.34.0-0</code>,  <code>1.32.0-0</code>,  <code>1.30.0-0</code>,  <code>1.28.0-1</code>,  <code>1.26.0-0</code>,  <code>1.24.0-0</code>,  </span></summary>
      

      ``1.38.0-0``,  ``1.36.0-0``,  ``1.34.0-1``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-0``,  ``1.28.0-1``,  ``1.26.0-0``,  ``1.24.0-0``,  ``1.22.0-0``

      
      .. raw:: html

         </details>
      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :depends r-fdrtool: 
   :depends r-mass: 
   :depends r-survival: 
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-hybridmtest

   and update with::

      conda update bioconductor-hybridmtest

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-hybridmtest:<tag>

   (see `bioconductor-hybridmtest/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-hybridmtest| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-hybridmtest.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-hybridmtest
   :alt:   (downloads)
.. |docker_bioconductor-hybridmtest| image:: https://quay.io/repository/biocontainers/bioconductor-hybridmtest/status
   :target: https://quay.io/repository/biocontainers/bioconductor-hybridmtest
.. _`bioconductor-hybridmtest/tags`: https://quay.io/repository/biocontainers/bioconductor-hybridmtest?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-hybridmtest";
        var versions = ["1.38.0","1.36.0","1.34.0","1.34.0","1.32.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
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