:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-hybridmtest' .. highlight: bash bioconductor-hybridmtest ======================== .. conda:recipe:: bioconductor-hybridmtest :replaces_section_title: :noindex: Hybrid Multiple Testing :homepage: https://bioconductor.org/packages/3.14/bioc/html/HybridMTest.html :license: GPL Version 2 or later :recipe: /`bioconductor-hybridmtest `_/`meta.yaml `_ :links: biotools: :biotools:`hybridmtest`, doi: :doi:`10.1038/nmeth.3252` Performs hybrid multiple testing that incorporates method selection and assumption evaluations into the analysis using empirical Bayes probability \(EBP\) estimates obtained by Grenander density estimation. For instance\, for 3\-group comparison analysis\, Hybrid Multiple testing considers EBPs as weighted EBPs between F\-test and H\-test with EBPs from Shapiro Wilk test of normality as weigth. Instead of just using EBPs from F\-test only or using H\-test only\, this methodology combines both types of EBPs through EBPs from Shapiro Wilk test of normality. This methodology uses then the law of total EBPs. .. conda:package:: bioconductor-hybridmtest |downloads_bioconductor-hybridmtest| |docker_bioconductor-hybridmtest| :versions: .. raw:: html
1.38.0-01.36.0-01.34.0-11.34.0-01.32.0-01.30.0-01.28.0-11.26.0-01.24.0-0 ``1.38.0-0``,  ``1.36.0-0``,  ``1.34.0-1``,  ``1.34.0-0``,  ``1.32.0-0``,  ``1.30.0-0``,  ``1.28.0-1``,  ``1.26.0-0``,  ``1.24.0-0``,  ``1.22.0-0`` .. raw:: html
:depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-fdrtool: :depends r-mass: :depends r-survival: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-hybridmtest and update with:: conda update bioconductor-hybridmtest or use the docker container:: docker pull quay.io/biocontainers/bioconductor-hybridmtest: (see `bioconductor-hybridmtest/tags`_ for valid values for ````) .. |downloads_bioconductor-hybridmtest| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-hybridmtest.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-hybridmtest :alt: (downloads) .. |docker_bioconductor-hybridmtest| image:: https://quay.io/repository/biocontainers/bioconductor-hybridmtest/status :target: https://quay.io/repository/biocontainers/bioconductor-hybridmtest .. _`bioconductor-hybridmtest/tags`: https://quay.io/repository/biocontainers/bioconductor-hybridmtest?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-hybridmtest/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-hybridmtest/README.html