:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-lydata' .. highlight: bash bioconductor-lydata =================== .. conda:recipe:: bioconductor-lydata :replaces_section_title: :noindex: Example Dataset for crossmeta Package :homepage: https://bioconductor.org/packages/3.18/data/experiment/html/lydata.html :license: MIT + file LICENSE :recipe: /`bioconductor-lydata `_/`meta.yaml `_ Raw data downloaded from GEO for the compound LY294002. Raw data is from multiple platforms from Affymetrix and Illumina. This data is used to illustrate the cross\-platform meta\-analysis of microarray data using the crossmeta package. .. conda:package:: bioconductor-lydata |downloads_bioconductor-lydata| |docker_bioconductor-lydata| :versions: .. raw:: html
1.28.0-01.26.0-01.23.0-01.20.0-11.20.0-01.18.0-01.16.0-11.16.0-01.15.0-0 ``1.28.0-0``,  ``1.26.0-0``,  ``1.23.0-0``,  ``1.20.0-1``,  ``1.20.0-0``,  ``1.18.0-0``,  ``1.16.0-1``,  ``1.16.0-0``,  ``1.15.0-0``,  ``1.14.0-0``,  ``1.12.0-0``,  ``1.10.0-1``,  ``1.10.0-0``,  ``1.8.0-0`` .. raw:: html
:depends bioconductor-data-packages: ``>=20231203`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-lydata and update with:: mamba update bioconductor-lydata To create a new environment, run:: mamba create --name myenvname bioconductor-lydata with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-lydata: (see `bioconductor-lydata/tags`_ for valid values for ````) .. |downloads_bioconductor-lydata| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-lydata.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-lydata :alt: (downloads) .. |docker_bioconductor-lydata| image:: https://quay.io/repository/biocontainers/bioconductor-lydata/status :target: https://quay.io/repository/biocontainers/bioconductor-lydata .. _`bioconductor-lydata/tags`: https://quay.io/repository/biocontainers/bioconductor-lydata?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-lydata/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-lydata/README.html