:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-mirlab'
.. highlight: bash

bioconductor-mirlab
===================

.. conda:recipe:: bioconductor-mirlab
   :replaces_section_title:
   :noindex:

   Dry lab for exploring miRNA\-mRNA relationships

   :homepage: https://bioconductor.org/packages/3.18/bioc/html/miRLAB.html
   :license: GPL (>=2)
   :recipe: /`bioconductor-mirlab <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mirlab>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mirlab/meta.yaml>`_

   Provide tools exploring miRNA\-mRNA relationships\, including popular miRNA target prediction methods\, ensemble methods that integrate individual methods\, functions to get data from online resources\, functions to validate the results\, and functions to conduct enrichment analyses.


.. conda:package:: bioconductor-mirlab

   |downloads_bioconductor-mirlab| |docker_bioconductor-mirlab|

   :versions:
      
      

      ``1.32.0-0``,  ``1.30.0-0``,  ``1.28.0-0``,  ``1.24.0-0``,  ``1.22.0-0``

      

   
   :depends bioconductor-category: ``>=2.68.0,<2.69.0``
   :depends bioconductor-ctc: ``>=1.76.0,<1.77.0``
   :depends bioconductor-gostats: ``>=2.68.0,<2.69.0``
   :depends bioconductor-impute: ``>=1.76.0,<1.77.0``
   :depends bioconductor-limma: ``>=3.58.0,<3.59.0``
   :depends bioconductor-org.hs.eg.db: ``>=3.18.0,<3.19.0``
   :depends bioconductor-summarizedexperiment: ``>=1.32.0,<1.33.0``
   :depends bioconductor-tcgabiolinks: ``>=2.30.0,<2.31.0``
   :depends r-base: ``>=4.3,<4.4.0a0``
   :depends r-dplyr: 
   :depends r-energy: 
   :depends r-entropy: 
   :depends r-glmnet: 
   :depends r-gplots: 
   :depends r-hmisc: 
   :depends r-httr: 
   :depends r-invariantcausalprediction: 
   :depends r-pcalg: 
   :depends r-rcurl: 
   :depends r-stringr: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-mirlab

   and update with::

      mamba update bioconductor-mirlab

  To create a new environment, run::

      mamba create --name myenvname bioconductor-mirlab

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-mirlab:<tag>

   (see `bioconductor-mirlab/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-mirlab| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-mirlab.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-mirlab
   :alt:   (downloads)
.. |docker_bioconductor-mirlab| image:: https://quay.io/repository/biocontainers/bioconductor-mirlab/status
   :target: https://quay.io/repository/biocontainers/bioconductor-mirlab
.. _`bioconductor-mirlab/tags`: https://quay.io/repository/biocontainers/bioconductor-mirlab?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-mirlab";
        var versions = ["1.32.0","1.30.0","1.28.0","1.24.0","1.22.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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