:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-nullrangesdata'
.. highlight: bash

bioconductor-nullrangesdata
===========================

.. conda:recipe:: bioconductor-nullrangesdata
   :replaces_section_title:
   :noindex:

   ExperimentHub datasets for the nullranges package

   :homepage: https://bioconductor.org/packages/3.18/data/experiment/html/nullrangesData.html
   :license: GPL-3
   :recipe: /`bioconductor-nullrangesdata <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-nullrangesdata>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-nullrangesdata/meta.yaml>`_

   Provides datasets for the nullranges package vignette\, in particular example datasets for DNase hypersensitivity sites \(DHS\)\, CTCF binding sites\, and CTCF genomic interactions. These are used to demonstrate generation of null hypothesis feature sets\, either through block bootstrapping or matching\, in the nullranges vignette.  For more details\, see the data object man pages\, and the R scripts for object construction provided within the package.


.. conda:package:: bioconductor-nullrangesdata

   |downloads_bioconductor-nullrangesdata| |docker_bioconductor-nullrangesdata|

   :versions:
      
      

      ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.0.0-1``,  ``1.0.0-0``

      

   
   :depends bioconductor-data-packages: ``>=20231203``
   :depends bioconductor-experimenthub: ``>=2.10.0,<2.11.0``
   :depends bioconductor-genomicranges: ``>=1.54.0,<1.55.0``
   :depends bioconductor-interactionset: ``>=1.30.0,<1.31.0``
   :depends curl: 
   :depends r-base: ``>=4.3,<4.4.0a0``
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install bioconductor-nullrangesdata

   and update with::

      mamba update bioconductor-nullrangesdata

  To create a new environment, run::

      mamba create --name myenvname bioconductor-nullrangesdata

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/bioconductor-nullrangesdata:<tag>

   (see `bioconductor-nullrangesdata/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-nullrangesdata| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-nullrangesdata.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-nullrangesdata
   :alt:   (downloads)
.. |docker_bioconductor-nullrangesdata| image:: https://quay.io/repository/biocontainers/bioconductor-nullrangesdata/status
   :target: https://quay.io/repository/biocontainers/bioconductor-nullrangesdata
.. _`bioconductor-nullrangesdata/tags`: https://quay.io/repository/biocontainers/bioconductor-nullrangesdata?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-nullrangesdata";
        var versions = ["1.8.0","1.6.0","1.4.0","1.0.0","1.0.0"];
    </script>






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-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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