:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-panther.db' .. highlight: bash bioconductor-panther.db ======================= .. conda:recipe:: bioconductor-panther.db :replaces_section_title: :noindex: A set of annotation maps describing the entire PANTHER Gene Ontology :homepage: https://bioconductor.org/packages/3.18/data/annotation/html/PANTHER.db.html :license: Artistic-2.0 :recipe: /`bioconductor-panther.db `_/`meta.yaml `_ A set of annotation maps describing the entire Gene Ontology assembled using data from PANTHER. .. conda:package:: bioconductor-panther.db |downloads_bioconductor-panther.db| |docker_bioconductor-panther.db| :versions: .. raw:: html
1.0.12-01.0.11-41.0.11-31.0.11-21.0.11-11.0.11-01.0.10-21.0.10-11.0.10-0 ``1.0.12-0``,  ``1.0.11-4``,  ``1.0.11-3``,  ``1.0.11-2``,  ``1.0.11-1``,  ``1.0.11-0``,  ``1.0.10-2``,  ``1.0.10-1``,  ``1.0.10-0``,  ``1.0.5-0``,  ``1.0.4-5``,  ``1.0.4-3``,  ``1.0.4-2``,  ``1.0.4-0`` .. raw:: html
:depends bioconductor-annotationdbi: ``>=1.64.0,<1.65.0`` :depends bioconductor-annotationhub: ``>=3.10.0,<3.11.0`` :depends bioconductor-biocfilecache: ``>=2.10.0,<2.11.0`` :depends bioconductor-data-packages: ``>=20231203`` :depends curl: :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-rsqlite: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-panther.db and update with:: mamba update bioconductor-panther.db To create a new environment, run:: mamba create --name myenvname bioconductor-panther.db with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-panther.db: (see `bioconductor-panther.db/tags`_ for valid values for ````) .. |downloads_bioconductor-panther.db| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-panther.db.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-panther.db :alt: (downloads) .. |docker_bioconductor-panther.db| image:: https://quay.io/repository/biocontainers/bioconductor-panther.db/status :target: https://quay.io/repository/biocontainers/bioconductor-panther.db .. _`bioconductor-panther.db/tags`: https://quay.io/repository/biocontainers/bioconductor-panther.db?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-panther.db/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-panther.db/README.html