:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-prolocgui' .. highlight: bash bioconductor-prolocgui ====================== .. conda:recipe:: bioconductor-prolocgui :replaces_section_title: :noindex: Interactive visualisation of spatial proteomics data :homepage: https://bioconductor.org/packages/3.14/bioc/html/pRolocGUI.html :license: GPL-2 :recipe: /`bioconductor-prolocgui `_/`meta.yaml `_ :links: biotools: :biotools:`prolocgui`, doi: :doi:`10.1038/ncomms9992` The package pRolocGUI comprises functions to interactively visualise organelle \(spatial\) proteomics data on the basis of pRoloc\, pRolocdata and shiny. .. conda:package:: bioconductor-prolocgui |downloads_bioconductor-prolocgui| |docker_bioconductor-prolocgui| :versions: ``2.4.0-0``,  ``2.2.0-0``,  ``2.0.0-1``,  ``2.0.0-0``,  ``1.22.0-0``,  ``1.20.0-0``,  ``1.18.0-1``,  ``1.16.0-0``,  ``1.12.0-0`` :depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-biocgenerics: ``>=0.40.0,<0.41.0`` :depends bioconductor-msnbase: ``>=2.20.0,<2.21.0`` :depends bioconductor-proloc: ``>=1.34.0,<1.35.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-colorspace: :depends r-colourpicker: :depends r-dplyr: :depends r-dt: ``>=0.1.40`` :depends r-ggplot2: :depends r-scales: :depends r-shiny: ``>=0.9.1`` :depends r-shinydashboard: :depends r-shinydashboardplus: :depends r-shinyhelper: :depends r-shinyjs: :depends r-shinywidgets: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-prolocgui and update with:: conda update bioconductor-prolocgui or use the docker container:: docker pull quay.io/biocontainers/bioconductor-prolocgui: (see `bioconductor-prolocgui/tags`_ for valid values for ````) .. |downloads_bioconductor-prolocgui| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-prolocgui.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-prolocgui :alt: (downloads) .. |docker_bioconductor-prolocgui| image:: https://quay.io/repository/biocontainers/bioconductor-prolocgui/status :target: https://quay.io/repository/biocontainers/bioconductor-prolocgui .. _`bioconductor-prolocgui/tags`: https://quay.io/repository/biocontainers/bioconductor-prolocgui?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-prolocgui/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-prolocgui/README.html