:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-rhdf5filters' .. highlight: bash bioconductor-rhdf5filters ========================= .. conda:recipe:: bioconductor-rhdf5filters :replaces_section_title: :noindex: HDF5 Compression Filters :homepage: https://bioconductor.org/packages/3.18/bioc/html/rhdf5filters.html :license: BSD_2_clause + file LICENSE :recipe: /`bioconductor-rhdf5filters `_/`meta.yaml `_ Provides a collection of additional compression filters for HDF5 datasets. The package is intended to provide seemless integration with rhdf5\, however the compiled filters can also be used with external applications. .. conda:package:: bioconductor-rhdf5filters |downloads_bioconductor-rhdf5filters| |docker_bioconductor-rhdf5filters| :versions: .. raw:: html
1.14.1-01.12.1-11.12.1-01.10.0-11.10.0-01.6.0-21.6.0-11.6.0-01.4.0-0 ``1.14.1-0``,  ``1.12.1-1``,  ``1.12.1-0``,  ``1.10.0-1``,  ``1.10.0-0``,  ``1.6.0-2``,  ``1.6.0-1``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.0-1``,  ``1.2.0-0``,  ``1.0.0-0`` .. raw:: html
:depends bioconductor-rhdf5lib: ``>=1.24.0,<1.25.0`` :depends bioconductor-rhdf5lib: ``>=1.24.0,<1.25.0a0`` :depends libblas: ``>=3.9.0,<4.0a0`` :depends libgcc-ng: ``>=12`` :depends liblapack: ``>=3.9.0,<4.0a0`` :depends libstdcxx-ng: ``>=12`` :depends r-base: ``>=4.3,<4.4.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-rhdf5filters and update with:: mamba update bioconductor-rhdf5filters To create a new environment, run:: mamba create --name myenvname bioconductor-rhdf5filters with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-rhdf5filters: (see `bioconductor-rhdf5filters/tags`_ for valid values for ````) .. |downloads_bioconductor-rhdf5filters| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-rhdf5filters.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-rhdf5filters :alt: (downloads) .. |docker_bioconductor-rhdf5filters| image:: https://quay.io/repository/biocontainers/bioconductor-rhdf5filters/status :target: https://quay.io/repository/biocontainers/bioconductor-rhdf5filters .. _`bioconductor-rhdf5filters/tags`: https://quay.io/repository/biocontainers/bioconductor-rhdf5filters?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rhdf5filters/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-rhdf5filters/README.html