:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-rnits' .. highlight: bash bioconductor-rnits ================== .. conda:recipe:: bioconductor-rnits :replaces_section_title: :noindex: R Normalization and Inference of Time Series data :homepage: https://bioconductor.org/packages/3.18/bioc/html/Rnits.html :license: GPL-3 :recipe: /`bioconductor-rnits `_/`meta.yaml `_ R\/Bioconductor package for normalization\, curve registration and inference in time course gene expression data. .. conda:package:: bioconductor-rnits |downloads_bioconductor-rnits| |docker_bioconductor-rnits| :versions: .. raw:: html
1.36.0-01.34.0-01.28.0-01.26.0-01.24.0-11.24.0-01.22.0-01.20.0-01.18.0-1 ``1.36.0-0``,  ``1.34.0-0``,  ``1.28.0-0``,  ``1.26.0-0``,  ``1.24.0-1``,  ``1.24.0-0``,  ``1.22.0-0``,  ``1.20.0-0``,  ``1.18.0-1``,  ``1.16.0-0``,  ``1.14.0-0``,  ``1.12.0-0``,  ``1.11.0-0``,  ``1.10.0-0`` .. raw:: html
:depends bioconductor-affy: ``>=1.80.0,<1.81.0`` :depends bioconductor-biobase: ``>=2.62.0,<2.63.0`` :depends bioconductor-impute: ``>=1.76.0,<1.77.0`` :depends bioconductor-limma: ``>=3.58.0,<3.59.0`` :depends bioconductor-qvalue: ``>=2.34.0,<2.35.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-boot: :depends r-ggplot2: :depends r-reshape2: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-rnits and update with:: mamba update bioconductor-rnits To create a new environment, run:: mamba create --name myenvname bioconductor-rnits with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-rnits: (see `bioconductor-rnits/tags`_ for valid values for ````) .. |downloads_bioconductor-rnits| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-rnits.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-rnits :alt: (downloads) .. |docker_bioconductor-rnits| image:: https://quay.io/repository/biocontainers/bioconductor-rnits/status :target: https://quay.io/repository/biocontainers/bioconductor-rnits .. _`bioconductor-rnits/tags`: https://quay.io/repository/biocontainers/bioconductor-rnits?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rnits/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-rnits/README.html