:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-tmixclust' .. highlight: bash bioconductor-tmixclust ====================== .. conda:recipe:: bioconductor-tmixclust :replaces_section_title: :noindex: Time Series Clustering of Gene Expression with Gaussian Mixed\-Effects Models and Smoothing Splines :homepage: https://bioconductor.org/packages/3.14/bioc/html/TMixClust.html :license: GPL (>=2) :recipe: /`bioconductor-tmixclust `_/`meta.yaml `_ Implementation of a clustering method for time series gene expression data based on mixed\-effects models with Gaussian variables and non\-parametric cubic splines estimation. The method can robustly account for the high levels of noise present in typical gene expression time series datasets. .. conda:package:: bioconductor-tmixclust |downloads_bioconductor-tmixclust| |docker_bioconductor-tmixclust| :versions: ``1.16.0-0``,  ``1.14.0-0``,  ``1.12.0-1``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.8.0-0``,  ``1.6.0-1``,  ``1.4.0-0`` :depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-biocparallel: ``>=1.28.0,<1.29.0`` :depends bioconductor-spem: ``>=1.34.0,<1.35.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-cluster: :depends r-flexclust: :depends r-gss: :depends r-mvtnorm: :depends r-zoo: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-tmixclust and update with:: conda update bioconductor-tmixclust or use the docker container:: docker pull quay.io/biocontainers/bioconductor-tmixclust: (see `bioconductor-tmixclust/tags`_ for valid values for ````) .. |downloads_bioconductor-tmixclust| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-tmixclust.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-tmixclust :alt: (downloads) .. |docker_bioconductor-tmixclust| image:: https://quay.io/repository/biocontainers/bioconductor-tmixclust/status :target: https://quay.io/repository/biocontainers/bioconductor-tmixclust .. _`bioconductor-tmixclust/tags`: https://quay.io/repository/biocontainers/bioconductor-tmixclust?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tmixclust/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-tmixclust/README.html