:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'bioconductor-tnt'
.. highlight: bash

bioconductor-tnt
================

.. conda:recipe:: bioconductor-tnt
   :replaces_section_title:
   :noindex:

   Interactive Visualization for Genomic Features

   :homepage: https://bioconductor.org/packages/3.14/bioc/html/TnT.html
   :license: AGPL-3
   :recipe: /`bioconductor-tnt <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-tnt>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-tnt/meta.yaml>`_

   A R interface to the TnT javascript library \(https\:\/\/github.com\/ tntvis\) to provide interactive and flexible visualization of track\-based genomic data.


.. conda:package:: bioconductor-tnt

   |downloads_bioconductor-tnt| |docker_bioconductor-tnt|

   :versions:
      
      

      ``1.16.0-0``,  ``1.14.0-0``,  ``1.12.0-1``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.8.0-0``,  ``1.6.0-1``,  ``1.4.0-0``

      

   
   :depends bioconductor-biobase: ``>=2.54.0,<2.55.0``
   :depends bioconductor-genomeinfodb: ``>=1.30.0,<1.31.0``
   :depends bioconductor-genomicranges: ``>=1.46.0,<1.47.0``
   :depends bioconductor-iranges: ``>=2.28.0,<2.29.0``
   :depends bioconductor-s4vectors: ``>=0.32.0,<0.33.0``
   :depends r-base: ``>=4.1,<4.2.0a0``
   :depends r-data.table: 
   :depends r-htmlwidgets: 
   :depends r-jsonlite: 
   :depends r-knitr: 
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install bioconductor-tnt

   and update with::

      conda update bioconductor-tnt

   or use the docker container::

      docker pull quay.io/biocontainers/bioconductor-tnt:<tag>

   (see `bioconductor-tnt/tags`_ for valid values for ``<tag>``)


.. |downloads_bioconductor-tnt| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-tnt.svg?style=flat
   :target: https://anaconda.org/bioconda/bioconductor-tnt
   :alt:   (downloads)
.. |docker_bioconductor-tnt| image:: https://quay.io/repository/biocontainers/bioconductor-tnt/status
   :target: https://quay.io/repository/biocontainers/bioconductor-tnt
.. _`bioconductor-tnt/tags`: https://quay.io/repository/biocontainers/bioconductor-tnt?tab=tags


.. raw:: html

    <script>
        var package = "bioconductor-tnt";
        var versions = ["1.16.0","1.14.0","1.12.0","1.12.0","1.10.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tnt/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/bioconductor-tnt/README.html