:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-tnt' .. highlight: bash bioconductor-tnt ================ .. conda:recipe:: bioconductor-tnt :replaces_section_title: :noindex: Interactive Visualization for Genomic Features :homepage: https://bioconductor.org/packages/3.14/bioc/html/TnT.html :license: AGPL-3 :recipe: /`bioconductor-tnt `_/`meta.yaml `_ A R interface to the TnT javascript library \(https\:\/\/github.com\/ tntvis\) to provide interactive and flexible visualization of track\-based genomic data. .. conda:package:: bioconductor-tnt |downloads_bioconductor-tnt| |docker_bioconductor-tnt| :versions: ``1.16.0-0``,  ``1.14.0-0``,  ``1.12.0-1``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.8.0-0``,  ``1.6.0-1``,  ``1.4.0-0`` :depends bioconductor-biobase: ``>=2.54.0,<2.55.0`` :depends bioconductor-genomeinfodb: ``>=1.30.0,<1.31.0`` :depends bioconductor-genomicranges: ``>=1.46.0,<1.47.0`` :depends bioconductor-iranges: ``>=2.28.0,<2.29.0`` :depends bioconductor-s4vectors: ``>=0.32.0,<0.33.0`` :depends r-base: ``>=4.1,<4.2.0a0`` :depends r-data.table: :depends r-htmlwidgets: :depends r-jsonlite: :depends r-knitr: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install bioconductor-tnt and update with:: conda update bioconductor-tnt or use the docker container:: docker pull quay.io/biocontainers/bioconductor-tnt: (see `bioconductor-tnt/tags`_ for valid values for ````) .. |downloads_bioconductor-tnt| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-tnt.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-tnt :alt: (downloads) .. |docker_bioconductor-tnt| image:: https://quay.io/repository/biocontainers/bioconductor-tnt/status :target: https://quay.io/repository/biocontainers/bioconductor-tnt .. _`bioconductor-tnt/tags`: https://quay.io/repository/biocontainers/bioconductor-tnt?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tnt/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-tnt/README.html