:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'bioconductor-trnadbimport' .. highlight: bash bioconductor-trnadbimport ========================= .. conda:recipe:: bioconductor-trnadbimport :replaces_section_title: :noindex: Importing from tRNAdb and mitotRNAdb as GRanges objects :homepage: https://bioconductor.org/packages/3.18/bioc/html/tRNAdbImport.html :license: GPL-3 + file LICENSE :recipe: /`bioconductor-trnadbimport `_/`meta.yaml `_ tRNAdbImport imports the entries of the tRNAdb and mtRNAdb \(http\:\/\/trna.bioinf.uni\-leipzig.de\) as GRanges object. .. conda:package:: bioconductor-trnadbimport |downloads_bioconductor-trnadbimport| |docker_bioconductor-trnadbimport| :versions: .. raw:: html
1.20.0-01.18.0-01.16.0-01.12.0-01.10.0-01.8.0-11.8.0-01.6.0-01.4.0-0 ``1.20.0-0``,  ``1.18.0-0``,  ``1.16.0-0``,  ``1.12.0-0``,  ``1.10.0-0``,  ``1.8.0-1``,  ``1.8.0-0``,  ``1.6.0-0``,  ``1.4.0-0``,  ``1.2.2-0``,  ``1.0.0-0`` .. raw:: html
:depends bioconductor-biocgenerics: ``>=0.48.0,<0.49.0`` :depends bioconductor-biostrings: ``>=2.70.0,<2.71.0`` :depends bioconductor-genomicranges: ``>=1.54.0,<1.55.0`` :depends bioconductor-iranges: ``>=2.36.0,<2.37.0`` :depends bioconductor-modstrings: ``>=1.18.0,<1.19.0`` :depends bioconductor-s4vectors: ``>=0.40.0,<0.41.0`` :depends bioconductor-structstrings: ``>=1.18.0,<1.19.0`` :depends bioconductor-trna: ``>=1.20.0,<1.21.0`` :depends r-base: ``>=4.3,<4.4.0a0`` :depends r-httr: :depends r-stringr: :depends r-xml2: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install bioconductor-trnadbimport and update with:: mamba update bioconductor-trnadbimport To create a new environment, run:: mamba create --name myenvname bioconductor-trnadbimport with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/bioconductor-trnadbimport: (see `bioconductor-trnadbimport/tags`_ for valid values for ````) .. |downloads_bioconductor-trnadbimport| image:: https://img.shields.io/conda/dn/bioconda/bioconductor-trnadbimport.svg?style=flat :target: https://anaconda.org/bioconda/bioconductor-trnadbimport :alt: (downloads) .. |docker_bioconductor-trnadbimport| image:: https://quay.io/repository/biocontainers/bioconductor-trnadbimport/status :target: https://quay.io/repository/biocontainers/bioconductor-trnadbimport .. _`bioconductor-trnadbimport/tags`: https://quay.io/repository/biocontainers/bioconductor-trnadbimport?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-trnadbimport/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/bioconductor-trnadbimport/README.html