:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'btllib' .. highlight: bash btllib ====== .. conda:recipe:: btllib :replaces_section_title: :noindex: Bioinformatics common code library in C\+\+ with Python wrappers\, from Bioinformatics Technology Lab :homepage: https://github.com/bcgsc/btllib :documentation: https://bcgsc.github.io/btllib/ :license: GPL3 / GPL-3.0-or-later :recipe: /`btllib `_/`meta.yaml `_ :links: doi: :doi:`10.21105/joss.04720`, doi: :doi:`10.1093/bioadv/vbad162` .. conda:package:: btllib |downloads_btllib| |docker_btllib| :versions: .. raw:: html
1.7.0-01.6.2-01.6.1-01.6.0-11.6.0-01.5.1-11.5.1-01.5.0-01.4.10-0 ``1.7.0-0``,  ``1.6.2-0``,  ``1.6.1-0``,  ``1.6.0-1``,  ``1.6.0-0``,  ``1.5.1-1``,  ``1.5.1-0``,  ``1.5.0-0``,  ``1.4.10-0``,  ``1.4.8-0``,  ``1.4.4-0``,  ``1.4.3-2``,  ``1.4.3-1``,  ``1.4.3-0`` .. raw:: html
:depends _openmp_mutex: ``>=4.5`` :depends bzip2: :depends gzip: :depends libgcc-ng: ``>=12`` :depends libgomp: :depends libstdcxx-ng: ``>=12`` :depends lrzip: :depends pigz: :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :depends samtools: :depends tar: :depends wget: :depends xz: :depends zip: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install btllib and update with:: mamba update btllib To create a new environment, run:: mamba create --name myenvname btllib with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/btllib: (see `btllib/tags`_ for valid values for ````) .. |downloads_btllib| image:: https://img.shields.io/conda/dn/bioconda/btllib.svg?style=flat :target: https://anaconda.org/bioconda/btllib :alt: (downloads) .. |docker_btllib| image:: https://quay.io/repository/biocontainers/btllib/status :target: https://quay.io/repository/biocontainers/btllib .. _`btllib/tags`: https://quay.io/repository/biocontainers/btllib?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/btllib/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/btllib/README.html