:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'deeplcretrainer' .. highlight: bash deeplcretrainer =============== .. conda:recipe:: deeplcretrainer :replaces_section_title: :noindex: Evaluating DeepLC performance and retraining prediction models. :homepage: https://github.com/RobbinBouwmeester/DeepLCRetrainer :license: Apache-2.0 :recipe: /`deeplcretrainer `_/`meta.yaml `_ .. conda:package:: deeplcretrainer |downloads_deeplcretrainer| |docker_deeplcretrainer| :versions: ``0.2.12-0``,  ``0.2.11-0``,  ``0.2.8-0``,  ``0.2.1-0``,  ``0.1.22-0``,  ``0.1.21-0``,  ``0.1.19-0``,  ``0.1.17-0`` :depends python: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install deeplcretrainer and update with:: mamba update deeplcretrainer To create a new environment, run:: mamba create --name myenvname deeplcretrainer with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/deeplcretrainer: (see `deeplcretrainer/tags`_ for valid values for ````) .. |downloads_deeplcretrainer| image:: https://img.shields.io/conda/dn/bioconda/deeplcretrainer.svg?style=flat :target: https://anaconda.org/bioconda/deeplcretrainer :alt: (downloads) .. |docker_deeplcretrainer| image:: https://quay.io/repository/biocontainers/deeplcretrainer/status :target: https://quay.io/repository/biocontainers/deeplcretrainer .. _`deeplcretrainer/tags`: https://quay.io/repository/biocontainers/deeplcretrainer?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/deeplcretrainer/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/deeplcretrainer/README.html