:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'elastic-blast' .. highlight: bash elastic-blast ============= .. conda:recipe:: elastic-blast :replaces_section_title: :noindex: ElasticBLAST is a cloud\-based tool to perform your BLAST searches faster and make you more effective. :homepage: https://pypi.org/project/elastic-blast/ :developer docs: https://github.com/ncbi/elastic-blast/ :license: PUBLIC-DOMAIN / Public Domain :recipe: /`elastic-blast `_/`meta.yaml `_ :links: biotools: :biotools:`blast`, doi: :doi:`10.1186/s12859-023-05245-9` .. conda:package:: elastic-blast |downloads_elastic-blast| |docker_elastic-blast| :versions: .. raw:: html
1.2.0-01.1.0-11.1.0-01.0.0-00.2.7-00.2.6-00.2.5-00.2.4-00.2.3-0 ``1.2.0-0``,  ``1.1.0-1``,  ``1.1.0-0``,  ``1.0.0-0``,  ``0.2.7-0``,  ``0.2.6-0``,  ``0.2.5-0``,  ``0.2.4-0``,  ``0.2.3-0``,  ``0.2.2-0``,  ``0.2.1-0``,  ``0.2.0-0``,  ``0.1.11-0``,  ``0.1.10-0``,  ``0.1.9-0``,  ``0.1.8-0``,  ``0.1.7-0``,  ``0.1.6-0``,  ``0.1.5-0``,  ``0.1.4-0`` .. raw:: html
:depends awscli: :depends awslimitchecker: :depends boto3: :depends dataclasses-json: :depends google-cloud-sdk: :depends importlib-metadata: :depends kubernetes-client: ``1.18.8`` :depends python: ``>=3.7,<3.10`` :depends tenacity: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install elastic-blast and update with:: mamba update elastic-blast To create a new environment, run:: mamba create --name myenvname elastic-blast with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/elastic-blast: (see `elastic-blast/tags`_ for valid values for ````) .. |downloads_elastic-blast| image:: https://img.shields.io/conda/dn/bioconda/elastic-blast.svg?style=flat :target: https://anaconda.org/bioconda/elastic-blast :alt: (downloads) .. |docker_elastic-blast| image:: https://quay.io/repository/biocontainers/elastic-blast/status :target: https://quay.io/repository/biocontainers/elastic-blast .. _`elastic-blast/tags`: https://quay.io/repository/biocontainers/elastic-blast?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/elastic-blast/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/elastic-blast/README.html