:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'elector' .. highlight: bash elector ======= .. conda:recipe:: elector :replaces_section_title: :noindex: ELECTOR EvaLuator of Error Correction Tools for lOng Reads :homepage: https://github.com/kamimrcht/ELECTOR :license: AGPL-3.0 :recipe: /`elector `_/`meta.yaml `_ .. conda:package:: elector |downloads_elector| |docker_elector| :versions: .. raw:: html
1.0.4-41.0.4-31.0.4-21.0.4-11.0.4-01.0.3-11.0.3-01.0.2-21.0.2-1 ``1.0.4-4``,  ``1.0.4-3``,  ``1.0.4-2``,  ``1.0.4-1``,  ``1.0.4-0``,  ``1.0.3-1``,  ``1.0.3-0``,  ``1.0.2-2``,  ``1.0.2-1``,  ``1.0.2-0``,  ``1.0.1-1``,  ``1.0.1-0`` .. raw:: html
:depends _openmp_mutex: ``>=4.5`` :depends biopython: :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends minimap2: :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :depends samtools: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install elector and update with:: mamba update elector To create a new environment, run:: mamba create --name myenvname elector with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/elector: (see `elector/tags`_ for valid values for ````) .. |downloads_elector| image:: https://img.shields.io/conda/dn/bioconda/elector.svg?style=flat :target: https://anaconda.org/bioconda/elector :alt: (downloads) .. |docker_elector| image:: https://quay.io/repository/biocontainers/elector/status :target: https://quay.io/repository/biocontainers/elector .. _`elector/tags`: https://quay.io/repository/biocontainers/elector?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/elector/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/elector/README.html