:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'fasta3'
.. highlight: bash

fasta3
======

.. conda:recipe:: fasta3
   :replaces_section_title:
   :noindex:

   The FASTA package \- protein and DNA sequence similarity searching and alignment programs

   :homepage: https://fasta.bioch.virginia.edu/wrpearson/fasta/
   :license: Apache 2.0
   :recipe: /`fasta3 <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/fasta3>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/fasta3/meta.yaml>`_

   


.. conda:package:: fasta3

   |downloads_fasta3| |docker_fasta3|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>36.3.8-7</code>,  <code>36.3.8-6</code>,  <code>36.3.8-5</code>,  <code>36.3.8-4</code>,  <code>36.3.8-3</code>,  <code>36.3.8-2</code>,  <code>36.3.8-1</code>,  <code>36.3.8-0</code>,  <code>36.3.8i-0</code>,  </span></summary>
      

      ``36.3.8-7``,  ``36.3.8-6``,  ``36.3.8-5``,  ``36.3.8-4``,  ``36.3.8-3``,  ``36.3.8-2``,  ``36.3.8-1``,  ``36.3.8-0``,  ``36.3.8i-0``,  ``36.3.8h-2``,  ``36.3.8h-1``,  ``36.3.8h-0``

      
      .. raw:: html

         </details>
      

   
   :depends libgcc-ng: ``>=10.3.0``
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install fasta3

   and update with::

      mamba update fasta3

  To create a new environment, run::

      mamba create --name myenvname fasta3

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/fasta3:<tag>

   (see `fasta3/tags`_ for valid values for ``<tag>``)


.. |downloads_fasta3| image:: https://img.shields.io/conda/dn/bioconda/fasta3.svg?style=flat
   :target: https://anaconda.org/bioconda/fasta3
   :alt:   (downloads)
.. |docker_fasta3| image:: https://quay.io/repository/biocontainers/fasta3/status
   :target: https://quay.io/repository/biocontainers/fasta3
.. _`fasta3/tags`: https://quay.io/repository/biocontainers/fasta3?tab=tags


.. raw:: html

    <script>
        var package = "fasta3";
        var versions = ["36.3.8","36.3.8","36.3.8","36.3.8","36.3.8"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fasta3/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/fasta3/README.html