:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'fastqc-rs' .. highlight: bash fastqc-rs ========= .. conda:recipe:: fastqc-rs :replaces_section_title: :noindex: A fast quality control tool for FASTQ files written in rust. :homepage: https://fastqc-rs.github.io :license: MIT :recipe: /`fastqc-rs `_/`meta.yaml `_ .. conda:package:: fastqc-rs |downloads_fastqc-rs| |docker_fastqc-rs| :versions: .. raw:: html
0.3.2-20.3.2-10.3.2-00.3.1-10.3.1-00.3.0-00.2.2-00.2.1-20.2.1-1 ``0.3.2-2``,  ``0.3.2-1``,  ``0.3.2-0``,  ``0.3.1-1``,  ``0.3.1-0``,  ``0.3.0-0``,  ``0.2.2-0``,  ``0.2.1-2``,  ``0.2.1-1``,  ``0.2.1-0``,  ``0.2.0-0``,  ``0.1.0-0`` .. raw:: html
:depends bzip2: ``>=1.0.8,<2.0a0`` :depends freetype: ``>=2.12.1,<3.0a0`` :depends libexpat: ``>=2.5.0,<3.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends openssl: ``>=3.1.1,<4.0a0`` :depends xz: ``>=5.2.6,<6.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install fastqc-rs and update with:: mamba update fastqc-rs To create a new environment, run:: mamba create --name myenvname fastqc-rs with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/fastqc-rs: (see `fastqc-rs/tags`_ for valid values for ````) .. |downloads_fastqc-rs| image:: https://img.shields.io/conda/dn/bioconda/fastqc-rs.svg?style=flat :target: https://anaconda.org/bioconda/fastqc-rs :alt: (downloads) .. |docker_fastqc-rs| image:: https://quay.io/repository/biocontainers/fastqc-rs/status :target: https://quay.io/repository/biocontainers/fastqc-rs .. _`fastqc-rs/tags`: https://quay.io/repository/biocontainers/fastqc-rs?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/fastqc-rs/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/fastqc-rs/README.html