:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'flash' .. highlight: bash flash ===== .. conda:recipe:: flash :replaces_section_title: :noindex: Merge mates from fragments that are shorter than twice the read length :homepage: https://ccb.jhu.edu/software/FLASH/ :license: GPLv3+ :recipe: /`flash `_/`meta.yaml `_ :links: biotools: :biotools:`flash` .. conda:package:: flash |downloads_flash| |docker_flash| :versions: ``1.2.11-5``,  ``1.2.11-4``,  ``1.2.11-3``,  ``1.2.11-2``,  ``1.2.11-1``,  ``1.2.11-0`` :depends libgcc-ng: ``>=7.3.0`` :depends zlib: ``>=1.2.11,<1.3.0a0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install flash and update with:: conda update flash or use the docker container:: docker pull quay.io/biocontainers/flash: (see `flash/tags`_ for valid values for ````) .. |downloads_flash| image:: https://img.shields.io/conda/dn/bioconda/flash.svg?style=flat :target: https://anaconda.org/bioconda/flash :alt: (downloads) .. |docker_flash| image:: https://quay.io/repository/biocontainers/flash/status :target: https://quay.io/repository/biocontainers/flash .. _`flash/tags`: https://quay.io/repository/biocontainers/flash?tab=tags Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/flash/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/flash/README.html