:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'galaxy-files' .. highlight: bash galaxy-files ============ .. conda:recipe:: galaxy-files :replaces_section_title: :noindex: The Galaxy file sources framework and default plugins. :homepage: https://galaxyproject.org :documentation: https://docs.galaxyproject.org :developer docs: https://github.com/galaxyproject/galaxy :license: AFL-3.0 :recipe: /`galaxy-files `_/`meta.yaml `_ :links: biotools: :biotools:`galaxy`, doi: :doi:`10.1093/nar/gky379` .. conda:package:: galaxy-files |downloads_galaxy-files| |docker_galaxy-files| :versions: ``24.0.0-0``,  ``23.2.1-0``,  ``23.1.4-0``,  ``23.1.3-0``,  ``23.1.2-0``,  ``23.1.1-0``,  ``23.0.6-0``,  ``23.0.5-0``,  ``23.0.4-0`` :depends fs: :depends galaxy-util: ``>=24.0`` :depends python: ``>=3.7`` :depends typing-extensions: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install galaxy-files and update with:: mamba update galaxy-files To create a new environment, run:: mamba create --name myenvname galaxy-files with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/galaxy-files: (see `galaxy-files/tags`_ for valid values for ````) .. |downloads_galaxy-files| image:: https://img.shields.io/conda/dn/bioconda/galaxy-files.svg?style=flat :target: https://anaconda.org/bioconda/galaxy-files :alt: (downloads) .. |docker_galaxy-files| image:: https://quay.io/repository/biocontainers/galaxy-files/status :target: https://quay.io/repository/biocontainers/galaxy-files .. _`galaxy-files/tags`: https://quay.io/repository/biocontainers/galaxy-files?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/galaxy-files/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/galaxy-files/README.html