:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genbank' .. highlight: bash genbank ======= .. conda:recipe:: genbank :replaces_section_title: :noindex: Code to work with Genbank files :homepage: https://github.com/deprekate/genbank :license: GPL3 / GPL-3.0-or-later :recipe: /`genbank `_/`meta.yaml `_ .. conda:package:: genbank |downloads_genbank| |docker_genbank| :versions: ``0.110-0`` :depends libgcc-ng: ``>=12`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genbank and update with:: mamba update genbank To create a new environment, run:: mamba create --name myenvname genbank with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genbank: (see `genbank/tags`_ for valid values for ````) .. |downloads_genbank| image:: https://img.shields.io/conda/dn/bioconda/genbank.svg?style=flat :target: https://anaconda.org/bioconda/genbank :alt: (downloads) .. |docker_genbank| image:: https://quay.io/repository/biocontainers/genbank/status :target: https://quay.io/repository/biocontainers/genbank .. _`genbank/tags`: https://quay.io/repository/biocontainers/genbank?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genbank/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genbank/README.html