:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genoboo' .. highlight: bash genoboo ======= .. conda:recipe:: genoboo :replaces_section_title: :noindex: A collaborative notebook for comparative genomics \(active fork of GeneNoteBook\) :homepage: https://github.com/gogepp/genoboo :license: AGPL-3.0 :recipe: /`genoboo `_/`meta.yaml `_ .. conda:package:: genoboo |downloads_genoboo| |docker_genoboo| :versions: .. raw:: html
0.4.15-00.4.13-00.4.12-00.4.11-00.4.10-00.4.9-00.4.8-00.4.7-00.4.5-0 ``0.4.15-0``,  ``0.4.13-0``,  ``0.4.12-0``,  ``0.4.11-0``,  ``0.4.10-0``,  ``0.4.9-0``,  ``0.4.8-0``,  ``0.4.7-0``,  ``0.4.5-0``,  ``0.4.4-0``,  ``0.4.3-1``,  ``0.4.3-0``,  ``0.4.2-0``,  ``0.4.1-0``,  ``0.4.0-0`` .. raw:: html
:depends blast: :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends mongodb: ``>=5.0`` :depends nodejs: ``>=15,<16`` :depends nodejs: ``>=15.14.0,<16.0a0`` :depends python_abi: ``3.11.* *_cp311`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genoboo and update with:: mamba update genoboo To create a new environment, run:: mamba create --name myenvname genoboo with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genoboo: (see `genoboo/tags`_ for valid values for ````) .. |downloads_genoboo| image:: https://img.shields.io/conda/dn/bioconda/genoboo.svg?style=flat :target: https://anaconda.org/bioconda/genoboo :alt: (downloads) .. |docker_genoboo| image:: https://quay.io/repository/biocontainers/genoboo/status :target: https://quay.io/repository/biocontainers/genoboo .. _`genoboo/tags`: https://quay.io/repository/biocontainers/genoboo?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genoboo/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genoboo/README.html