:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genometools-genometools' .. highlight: bash genometools-genometools ======================= .. conda:recipe:: genometools-genometools :replaces_section_title: :noindex: GenomeTools genome analysis system. :homepage: http://genometools.org/ :documentation: http://genometools.org/documentation.html :developer docs: https://github.com/genometools/genometools :license: BSD :recipe: /`genometools-genometools `_/`meta.yaml `_ :links: doi: :doi:`10.1109/TCBB.2013.68` .. conda:package:: genometools-genometools |downloads_genometools-genometools| |docker_genometools-genometools| :versions: .. raw:: html
1.6.5-01.6.4-01.6.3-01.6.2-61.6.2-41.6.2-31.6.2-21.6.2-11.6.2-0 ``1.6.5-0``,  ``1.6.4-0``,  ``1.6.3-0``,  ``1.6.2-6``,  ``1.6.2-4``,  ``1.6.2-3``,  ``1.6.2-2``,  ``1.6.2-1``,  ``1.6.2-0``,  ``1.6.1-2``,  ``1.6.1-1``,  ``1.6.1-0``,  ``1.6.0-0``,  ``1.5.10-3``,  ``1.5.10-2`` .. raw:: html
:depends cairo: ``>=1.18.0,<2.0a0`` :depends font-ttf-dejavu-sans-mono: :depends fontconfig: :depends gettext: :depends libgcc-ng: ``>=12`` :depends libglib: ``>=2.78.0,<3.0a0`` :depends libstdcxx-ng: ``>=12`` :depends pango: ``>=1.50.14,<2.0a0`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :depends xorg-libsm: :depends xorg-libxext: :depends xorg-libxrender: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genometools-genometools and update with:: mamba update genometools-genometools To create a new environment, run:: mamba create --name myenvname genometools-genometools with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genometools-genometools: (see `genometools-genometools/tags`_ for valid values for ````) .. |downloads_genometools-genometools| image:: https://img.shields.io/conda/dn/bioconda/genometools-genometools.svg?style=flat :target: https://anaconda.org/bioconda/genometools-genometools :alt: (downloads) .. |docker_genometools-genometools| image:: https://quay.io/repository/biocontainers/genometools-genometools/status :target: https://quay.io/repository/biocontainers/genometools-genometools .. _`genometools-genometools/tags`: https://quay.io/repository/biocontainers/genometools-genometools?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genometools-genometools/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genometools-genometools/README.html