:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genomic_address_service' .. highlight: bash genomic_address_service ======================= .. conda:recipe:: genomic_address_service :replaces_section_title: :noindex: Genomic Address Service\: De novo clustering and cluster address assignment :homepage: https://pypi.org/project/genomic-address-service :developer docs: https://github.com/phac-nml/genomic_address_service :license: Apache-2.0 :recipe: /`genomic_address_service `_/`meta.yaml `_ .. conda:package:: genomic_address_service |downloads_genomic_address_service| |docker_genomic_address_service| :versions: ``0.1.1-1``,  ``0.1.1-0`` :depends fastparquet: ``>=2023.4.0`` :depends numba: :depends numpy: :depends pandas: ``>=2.0.2`` :depends psutil: :depends pyarrow: ``>=12.0.0`` :depends pytables: ``>=3.8.0`` :depends python: ``>=3.8,<4`` :depends scipy: :depends six: ``>=1.16.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genomic_address_service and update with:: mamba update genomic_address_service To create a new environment, run:: mamba create --name myenvname genomic_address_service with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genomic_address_service: (see `genomic_address_service/tags`_ for valid values for ````) .. |downloads_genomic_address_service| image:: https://img.shields.io/conda/dn/bioconda/genomic_address_service.svg?style=flat :target: https://anaconda.org/bioconda/genomic_address_service :alt: (downloads) .. |docker_genomic_address_service| image:: https://quay.io/repository/biocontainers/genomic_address_service/status :target: https://quay.io/repository/biocontainers/genomic_address_service .. _`genomic_address_service/tags`: https://quay.io/repository/biocontainers/genomic_address_service?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genomic_address_service/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genomic_address_service/README.html