:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'genonets' .. highlight: bash genonets ======== .. conda:recipe:: genonets :replaces_section_title: :noindex: Framework for creating and analyzing genotype networks from data. :homepage: https://github.com/fkhalid/genonets :license: MIT / MIT License :recipe: /`genonets `_/`meta.yaml `_ :links: biotools: :biotools:`genonets`, doi: :doi:`10.1093/nar/gkw313` .. conda:package:: genonets |downloads_genonets| |docker_genonets| :versions: ``2.0-0``,  ``1.1.10-0``,  ``1.1.8-0``,  ``1.1.6-2``,  ``1.1.6-1``,  ``1.1.6-0`` :depends numpy: ``>=1.19`` :depends python: :depends python-igraph: ``>=0.8.2`` :depends tqdm: ``>=4.49.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install genonets and update with:: mamba update genonets To create a new environment, run:: mamba create --name myenvname genonets with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/genonets: (see `genonets/tags`_ for valid values for ````) .. |downloads_genonets| image:: https://img.shields.io/conda/dn/bioconda/genonets.svg?style=flat :target: https://anaconda.org/bioconda/genonets :alt: (downloads) .. |docker_genonets| image:: https://quay.io/repository/biocontainers/genonets/status :target: https://quay.io/repository/biocontainers/genonets .. _`genonets/tags`: https://quay.io/repository/biocontainers/genonets?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/genonets/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/genonets/README.html