:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'gfapy' .. highlight: bash gfapy ===== .. conda:recipe:: gfapy :replaces_section_title: :noindex: Library for handling data in the GFA1 and GFA2 formats :homepage: https://github.com/ggonnella/gfapy :license: Other / ISC License (ISCL) :recipe: /`gfapy `_/`meta.yaml `_ .. conda:package:: gfapy |downloads_gfapy| |docker_gfapy| :versions: .. raw:: html
1.2.3-01.2.2-01.2.1-01.2.0-01.1.0-01.0.0-21.0.0-11.0.0-01.0.0rc10-0 ``1.2.3-0``,  ``1.2.2-0``,  ``1.2.1-0``,  ``1.2.0-0``,  ``1.1.0-0``,  ``1.0.0-2``,  ``1.0.0-1``,  ``1.0.0-0``,  ``1.0.0rc10-0``,  ``1.0.0rc9-0`` .. raw:: html
:depends python: ``>=3`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install gfapy and update with:: mamba update gfapy To create a new environment, run:: mamba create --name myenvname gfapy with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/gfapy: (see `gfapy/tags`_ for valid values for ````) .. |downloads_gfapy| image:: https://img.shields.io/conda/dn/bioconda/gfapy.svg?style=flat :target: https://anaconda.org/bioconda/gfapy :alt: (downloads) .. |docker_gfapy| image:: https://quay.io/repository/biocontainers/gfapy/status :target: https://quay.io/repository/biocontainers/gfapy .. _`gfapy/tags`: https://quay.io/repository/biocontainers/gfapy?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/gfapy/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/gfapy/README.html