:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'gfftk' .. highlight: bash gfftk ===== .. conda:recipe:: gfftk :replaces_section_title: :noindex: GFFtk\: genome annotation GFF3 tool kit :homepage: https://github.com/nextgenusfs/gfftk :license: BSD / BSD-2-Clause :recipe: /`gfftk `_/`meta.yaml `_ .. conda:package:: gfftk |downloads_gfftk| |docker_gfftk| :versions: ``24.2.4-0``,  ``23.12.5-0``,  ``23.9.6-0`` :depends natsort: :depends numpy: :depends python: ``>=3.6`` :depends table2asn: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install gfftk and update with:: mamba update gfftk To create a new environment, run:: mamba create --name myenvname gfftk with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/gfftk: (see `gfftk/tags`_ for valid values for ````) .. |downloads_gfftk| image:: https://img.shields.io/conda/dn/bioconda/gfftk.svg?style=flat :target: https://anaconda.org/bioconda/gfftk :alt: (downloads) .. |docker_gfftk| image:: https://quay.io/repository/biocontainers/gfftk/status :target: https://quay.io/repository/biocontainers/gfftk .. _`gfftk/tags`: https://quay.io/repository/biocontainers/gfftk?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/gfftk/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/gfftk/README.html