:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'ig-checkflowtypes' .. highlight: bash ig-checkflowtypes ================= .. conda:recipe:: ig-checkflowtypes :replaces_section_title: :noindex: quick flow\-related datatype for galaxy checks :homepage: https://github.com/ImmPortDB/ig-checkflowtypes :license: BSD / BSD License :recipe: /`ig-checkflowtypes `_/`meta.yaml `_ .. conda:package:: ig-checkflowtypes |downloads_ig-checkflowtypes| |docker_ig-checkflowtypes| :versions: ``1.0.0-3``,  ``1.0.0-2``,  ``1.0.0-1``,  ``1.0.0-0`` :depends bioconductor-flowcore: :depends libgcc-ng: ``>=7.3.0`` :depends libgfortran-ng: ``>=7,<8.0a0`` :depends libstdcxx-ng: ``>=7.3.0`` :depends r-base: ``>=3.6,<3.7.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install ig-checkflowtypes and update with:: mamba update ig-checkflowtypes To create a new environment, run:: mamba create --name myenvname ig-checkflowtypes with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/ig-checkflowtypes: (see `ig-checkflowtypes/tags`_ for valid values for ````) .. |downloads_ig-checkflowtypes| image:: https://img.shields.io/conda/dn/bioconda/ig-checkflowtypes.svg?style=flat :target: https://anaconda.org/bioconda/ig-checkflowtypes :alt: (downloads) .. |docker_ig-checkflowtypes| image:: https://quay.io/repository/biocontainers/ig-checkflowtypes/status :target: https://quay.io/repository/biocontainers/ig-checkflowtypes .. _`ig-checkflowtypes/tags`: https://quay.io/repository/biocontainers/ig-checkflowtypes?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ig-checkflowtypes/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/ig-checkflowtypes/README.html