:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'igblast-parser' .. highlight: bash igblast-parser ============== .. conda:recipe:: igblast-parser :replaces_section_title: :noindex: Parser of Igblast results into a csv file :homepage: https://github.com/aerijman/igblast-parser :license: MIT :recipe: /`igblast-parser `_/`meta.yaml `_ .. conda:package:: igblast-parser |downloads_igblast-parser| |docker_igblast-parser| :versions: ``0.0.4-6``,  ``0.0.4-4``,  ``0.0.4-3``,  ``0.0.4-2``,  ``0.0.4-1``,  ``0.0.4-0``,  ``0.0.3-0`` :depends libgcc-ng: ``>=12`` :depends numpy: :depends pandas: :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install igblast-parser and update with:: mamba update igblast-parser To create a new environment, run:: mamba create --name myenvname igblast-parser with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/igblast-parser: (see `igblast-parser/tags`_ for valid values for ````) .. |downloads_igblast-parser| image:: https://img.shields.io/conda/dn/bioconda/igblast-parser.svg?style=flat :target: https://anaconda.org/bioconda/igblast-parser :alt: (downloads) .. |docker_igblast-parser| image:: https://quay.io/repository/biocontainers/igblast-parser/status :target: https://quay.io/repository/biocontainers/igblast-parser .. _`igblast-parser/tags`: https://quay.io/repository/biocontainers/igblast-parser?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/igblast-parser/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/igblast-parser/README.html