:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'lambda' .. highlight: bash lambda ====== .. conda:recipe:: lambda :replaces_section_title: :noindex: Lambda is a local aligner optimized for many query sequences and searches in protein space :homepage: http://seqan.github.io/lambda/ :license: AGPLv3 :recipe: /`lambda `_/`meta.yaml `_ .. conda:package:: lambda |downloads_lambda| |docker_lambda| :versions: .. raw:: html
3.0.0-02.0.1-02.0.0-62.0.0-52.0.0-42.0.0-32.0.0-22.0.0-12.0.0-0 ``3.0.0-0``,  ``2.0.1-0``,  ``2.0.0-6``,  ``2.0.0-5``,  ``2.0.0-4``,  ``2.0.0-3``,  ``2.0.0-2``,  ``2.0.0-1``,  ``2.0.0-0``,  ``1.0.3-5``,  ``1.0.3-4``,  ``1.0.3-3``,  ``1.0.3-2``,  ``1.0.3-1``,  ``1.0.3-0`` .. raw:: html
:depends _openmp_mutex: ``>=4.5`` :depends bzip2: ``>=1.0.8,<2.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install lambda and update with:: mamba update lambda To create a new environment, run:: mamba create --name myenvname lambda with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/lambda: (see `lambda/tags`_ for valid values for ````) .. |downloads_lambda| image:: https://img.shields.io/conda/dn/bioconda/lambda.svg?style=flat :target: https://anaconda.org/bioconda/lambda :alt: (downloads) .. |docker_lambda| image:: https://quay.io/repository/biocontainers/lambda/status :target: https://quay.io/repository/biocontainers/lambda .. _`lambda/tags`: https://quay.io/repository/biocontainers/lambda?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/lambda/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/lambda/README.html