:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'libgab' .. highlight: bash libgab ====== .. conda:recipe:: libgab :replaces_section_title: :noindex: Several C\+\+ subroutines useful for bioinformatics :homepage: https://github.com/grenaud/libgab :license: GPL :recipe: /`libgab `_/`meta.yaml `_ .. conda:package:: libgab |downloads_libgab| |docker_libgab| :versions: .. raw:: html
1.0.5-131.0.5-121.0.5-111.0.5-101.0.5-91.0.5-81.0.5-71.0.5-61.0.5-5 ``1.0.5-13``,  ``1.0.5-12``,  ``1.0.5-11``,  ``1.0.5-10``,  ``1.0.5-9``,  ``1.0.5-8``,  ``1.0.5-7``,  ``1.0.5-6``,  ``1.0.5-5``,  ``1.0.5-4``,  ``1.0.5-3``,  ``1.0.5-2``,  ``1.0.5-1``,  ``1.0.5-0``,  ``1.0.4-0`` .. raw:: html
:depends bamtools: ``>=2.5.1,<2.5.2.0a0`` :depends htslib: ``>=1.17,<1.21.0a0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends zlib: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install libgab and update with:: mamba update libgab To create a new environment, run:: mamba create --name myenvname libgab with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/libgab: (see `libgab/tags`_ for valid values for ````) .. |downloads_libgab| image:: https://img.shields.io/conda/dn/bioconda/libgab.svg?style=flat :target: https://anaconda.org/bioconda/libgab :alt: (downloads) .. |docker_libgab| image:: https://quay.io/repository/biocontainers/libgab/status :target: https://quay.io/repository/biocontainers/libgab .. _`libgab/tags`: https://quay.io/repository/biocontainers/libgab?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/libgab/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/libgab/README.html