:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'mageck' .. highlight: bash mageck ====== .. conda:recipe:: mageck :replaces_section_title: :noindex: MAGeCK \(Model\-based Analysis of Genome\-wide CRISPR\-Cas9 Knockout\)\, an algorithm to process\, QC\, analyze and visualize CRISPR screening data. :homepage: http://mageck.sourceforge.net :license: BSD License :recipe: /`mageck `_/`meta.yaml `_ .. conda:package:: mageck |downloads_mageck| |docker_mageck| :versions: .. raw:: html
0.5.9.5-10.5.9.5-00.5.9.4-10.5.9.4-00.5.9.3-20.5.9.3-10.5.9.3-00.5.9.2-00.5.9.1-0 ``0.5.9.5-1``,  ``0.5.9.5-0``,  ``0.5.9.4-1``,  ``0.5.9.4-0``,  ``0.5.9.3-2``,  ``0.5.9.3-1``,  ``0.5.9.3-0``,  ``0.5.9.2-0``,  ``0.5.9.1-0``,  ``0.5.9-0``,  ``0.5.8-0``,  ``0.5.8a-1``,  ``0.5.8a-0``,  ``0.5.7-7``,  ``0.5.7-6``,  ``0.5.7-5``,  ``0.5.7-4``,  ``0.5.7-2``,  ``0.5.7-1``,  ``0.5.7-0``,  ``0.5.7a-0``,  ``0.5.6-1``,  ``0.5.6-0``,  ``0.5.5-1``,  ``0.5.5-0``,  ``0.5.4-1``,  ``0.5.4-0``,  ``0.5.3-0``,  ``0.5.2-0`` .. raw:: html
:depends ipython: :depends libgcc-ng: ``>=10.3.0`` :depends libstdcxx-ng: ``>=10.3.0`` :depends numpy: :depends python: ``>=2.7,<2.8.0a0`` :depends python_abi: ``2.7.* *_cp27mu`` :depends scipy: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install mageck and update with:: conda update mageck or use the docker container:: docker pull quay.io/biocontainers/mageck: (see `mageck/tags`_ for valid values for ````) .. |downloads_mageck| image:: https://img.shields.io/conda/dn/bioconda/mageck.svg?style=flat :target: https://anaconda.org/bioconda/mageck :alt: (downloads) .. |docker_mageck| image:: https://quay.io/repository/biocontainers/mageck/status :target: https://quay.io/repository/biocontainers/mageck .. _`mageck/tags`: https://quay.io/repository/biocontainers/mageck?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/mageck/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/mageck/README.html