:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'markov_genome' .. highlight: bash markov_genome ============= .. conda:recipe:: markov_genome :replaces_section_title: :noindex: A Rust package for Markov chain sequence simulation. :homepage: https://github.com/eaasna/markov_genome :license: BSD-3-Clause License :recipe: /`markov_genome `_/`meta.yaml `_ .. conda:package:: markov_genome |downloads_markov_genome| |docker_markov_genome| :versions: ``1.0.0-0`` :requirements: :additional platforms: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install markov_genome and update with:: mamba update markov_genome To create a new environment, run:: mamba create --name myenvname markov_genome with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/markov_genome: (see `markov_genome/tags`_ for valid values for ````) .. |downloads_markov_genome| image:: https://img.shields.io/conda/dn/bioconda/markov_genome.svg?style=flat :target: https://anaconda.org/bioconda/markov_genome :alt: (downloads) .. |docker_markov_genome| image:: https://quay.io/repository/biocontainers/markov_genome/status :target: https://quay.io/repository/biocontainers/markov_genome .. _`markov_genome/tags`: https://quay.io/repository/biocontainers/markov_genome?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/markov_genome/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/markov_genome/README.html