:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'methplotlib'
.. highlight: bash

methplotlib
===========

.. conda:recipe:: methplotlib
   :replaces_section_title:
   :noindex:

   Plot methylation data obtained from nanopolish

   :homepage: https://github.com/wdecoster/methplotlib
   :license: MIT / MIT
   :recipe: /`methplotlib <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/methplotlib>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/methplotlib/meta.yaml>`_

   


.. conda:package:: methplotlib

   |downloads_methplotlib| |docker_methplotlib|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>0.20.1-0</code>,  <code>0.20.0-0</code>,  <code>0.19.0-0</code>,  <code>0.18.1-0</code>,  <code>0.17.0-0</code>,  <code>0.14.1-0</code>,  <code>0.14.0-0</code>,  <code>0.13.1-0</code>,  <code>0.13.0-0</code>,  </span></summary>
      

      ``0.20.1-0``,  ``0.20.0-0``,  ``0.19.0-0``,  ``0.18.1-0``,  ``0.17.0-0``,  ``0.14.1-0``,  ``0.14.0-0``,  ``0.13.1-0``,  ``0.13.0-0``,  ``0.12.0-0``,  ``0.8.0-0``,  ``0.7.0-0``,  ``0.6.0-0``,  ``0.4.0-0``

      
      .. raw:: html

         </details>
      

   
   :depends biopython: 
   :depends fisher: ``>=0.1.9``
   :depends numpy: ``>=1.14.3``
   :depends pandas: ``>=0.23.4``
   :depends plotly: ``>=4.9.0``
   :depends pyfaidx: 
   :depends pyranges: ``>=0.0.77``
   :depends pysam: 
   :depends python: ``>=3``
   :depends scikit-learn: 
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install methplotlib

   and update with::

      mamba update methplotlib

  To create a new environment, run::

      mamba create --name myenvname methplotlib

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/methplotlib:<tag>

   (see `methplotlib/tags`_ for valid values for ``<tag>``)


.. |downloads_methplotlib| image:: https://img.shields.io/conda/dn/bioconda/methplotlib.svg?style=flat
   :target: https://anaconda.org/bioconda/methplotlib
   :alt:   (downloads)
.. |docker_methplotlib| image:: https://quay.io/repository/biocontainers/methplotlib/status
   :target: https://quay.io/repository/biocontainers/methplotlib
.. _`methplotlib/tags`: https://quay.io/repository/biocontainers/methplotlib?tab=tags


.. raw:: html

    <script>
        var package = "methplotlib";
        var versions = ["0.20.1","0.20.0","0.19.0","0.18.1","0.17.0"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/methplotlib/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/methplotlib/README.html