:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'metilene' .. highlight: bash metilene ======== .. conda:recipe:: metilene :replaces_section_title: :noindex: Fast and sensitive detection of differential DNA methylation :homepage: http://www.bioinf.uni-leipzig.de/Software/metilene/ :license: GPLv2 :recipe: /`metilene `_/`meta.yaml `_ .. conda:package:: metilene |downloads_metilene| |docker_metilene| :versions: ``0.2.8-0``,  ``0.2.6-2``,  ``0.2.6-1``,  ``0.2.6-0`` :depends bedtools: ``>=2.24`` :depends libgcc-ng: ``>=7.3.0`` :depends perl: :depends r-base: :depends r-ggplot2: ``>=2.0.0`` :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install metilene and update with:: conda update metilene or use the docker container:: docker pull quay.io/biocontainers/metilene: (see `metilene/tags`_ for valid values for ````) .. |downloads_metilene| image:: https://img.shields.io/conda/dn/bioconda/metilene.svg?style=flat :target: https://anaconda.org/bioconda/metilene :alt: (downloads) .. |docker_metilene| image:: https://quay.io/repository/biocontainers/metilene/status :target: https://quay.io/repository/biocontainers/metilene .. _`metilene/tags`: https://quay.io/repository/biocontainers/metilene?tab=tags Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/metilene/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/metilene/README.html