:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'metilene'
.. highlight: bash

metilene
========

.. conda:recipe:: metilene
   :replaces_section_title:

   Fast and sensitive detection of differential DNA methylation

   :homepage: http://www.bioinf.uni-leipzig.de/Software/metilene/
   :license: GPLv2
   :recipe: /`metilene <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/metilene>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/metilene/meta.yaml>`_

   


.. conda:package:: metilene

   |downloads_metilene| |docker_metilene|

   :versions: 0.2.6-2, 0.2.6-1, 0.2.6-0
   
   :depends bedtools: >=2.24
   :depends libgcc-ng: >=7.3.0
   :depends perl: 
   :depends r-base: 
   :depends r-ggplot2: >=2.0.0
   :requirements:

   .. rubric:: Installation

   With an activated Bioconda channel (see :ref:`set-up-channels`), install with::

      conda install metilene

   and update with::

      conda update metilene

   or use the docker container::

      docker pull quay.io/biocontainers/metilene:<tag>

   (see `metilene/tags`_ for valid values for ``<tag>``)


.. |downloads_metilene| image:: https://img.shields.io/conda/dn/bioconda/metilene.svg?style=flat
   :alt:   (downloads)
.. |docker_metilene| image:: https://quay.io/repository/biocontainers/metilene/status
   :target: https://quay.io/repository/biocontainers/metilene
.. _`metilene/tags`: https://quay.io/repository/biocontainers/metilene?tab=tags







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