:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'ncbi-genome-download' .. highlight: bash ncbi-genome-download ==================== .. conda:recipe:: ncbi-genome-download :replaces_section_title: :noindex: Download genome files from the NCBI FTP server. :homepage: https://github.com/kblin/ncbi-genome-download/ :license: Apache / Apache Software License :recipe: /`ncbi-genome-download `_/`meta.yaml `_ .. conda:package:: ncbi-genome-download |downloads_ncbi-genome-download| |docker_ncbi-genome-download| :versions: .. raw:: html
0.3.3-00.3.2-00.3.1-10.3.1-00.3.0-10.3.0-00.2.12-00.2.11-00.2.10-0 ``0.3.3-0``,  ``0.3.2-0``,  ``0.3.1-1``,  ``0.3.1-0``,  ``0.3.0-1``,  ``0.3.0-0``,  ``0.2.12-0``,  ``0.2.11-0``,  ``0.2.10-0``,  ``0.2.9-0``,  ``0.2.8-1``,  ``0.2.8-0``,  ``0.2.7-0``,  ``0.2.6-1``,  ``0.2.6-0``,  ``0.2.5-1``,  ``0.2.5-0``,  ``0.2.4-0``,  ``0.2.2-0``,  ``0.2.0-0``,  ``0.1.8-0`` .. raw:: html
:depends appdirs: :depends python: :depends requests: ``>=2.4.3`` :depends tqdm: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install ncbi-genome-download and update with:: mamba update ncbi-genome-download To create a new environment, run:: mamba create --name myenvname ncbi-genome-download with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/ncbi-genome-download: (see `ncbi-genome-download/tags`_ for valid values for ````) .. |downloads_ncbi-genome-download| image:: https://img.shields.io/conda/dn/bioconda/ncbi-genome-download.svg?style=flat :target: https://anaconda.org/bioconda/ncbi-genome-download :alt: (downloads) .. |docker_ncbi-genome-download| image:: https://quay.io/repository/biocontainers/ncbi-genome-download/status :target: https://quay.io/repository/biocontainers/ncbi-genome-download .. _`ncbi-genome-download/tags`: https://quay.io/repository/biocontainers/ncbi-genome-download?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/ncbi-genome-download/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/ncbi-genome-download/README.html