:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'nemo' .. highlight: bash nemo ==== .. conda:recipe:: nemo :replaces_section_title: :noindex: Individual\-based forward\-time genetics simulation software :homepage: http://nemo2.sourceforge.net :license: GPLv2 :recipe: /`nemo `_/`meta.yaml `_ .. conda:package:: nemo |downloads_nemo| |docker_nemo| :versions: ``2.3.51-2``,  ``2.3.51-1``,  ``2.3.51-0`` :depends gsl: ``>=2.6,<2.7.0a0`` :depends libgcc-ng: ``>=7.5.0`` :depends libstdcxx-ng: ``>=7.5.0`` :depends openblas: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install nemo and update with:: mamba update nemo To create a new environment, run:: mamba create --name myenvname nemo with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/nemo: (see `nemo/tags`_ for valid values for ````) .. |downloads_nemo| image:: https://img.shields.io/conda/dn/bioconda/nemo.svg?style=flat :target: https://anaconda.org/bioconda/nemo :alt: (downloads) .. |docker_nemo| image:: https://quay.io/repository/biocontainers/nemo/status :target: https://quay.io/repository/biocontainers/nemo .. _`nemo/tags`: https://quay.io/repository/biocontainers/nemo?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nemo/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/nemo/README.html