:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'nwalign3' .. highlight: bash nwalign3 ======== .. conda:recipe:: nwalign3 :replaces_section_title: :noindex: Updated version of nwalign with Python 3.x compatibility. :homepage: https://github.com/briney/nwalign3 :license: BSD :recipe: /`nwalign3 `_/`meta.yaml `_ :links: biotools: :biotools:`nwalign3` .. conda:package:: nwalign3 |downloads_nwalign3| |docker_nwalign3| :versions: ``0.1.2-3``,  ``0.1.2-2``,  ``0.1.2-1``,  ``0.1.2-0`` :depends libgcc-ng: ``>=12`` :depends numpy: ``>=1.21.6,<2.0a0`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install nwalign3 and update with:: mamba update nwalign3 To create a new environment, run:: mamba create --name myenvname nwalign3 with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/nwalign3: (see `nwalign3/tags`_ for valid values for ````) .. |downloads_nwalign3| image:: https://img.shields.io/conda/dn/bioconda/nwalign3.svg?style=flat :target: https://anaconda.org/bioconda/nwalign3 :alt: (downloads) .. |docker_nwalign3| image:: https://quay.io/repository/biocontainers/nwalign3/status :target: https://quay.io/repository/biocontainers/nwalign3 .. _`nwalign3/tags`: https://quay.io/repository/biocontainers/nwalign3?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/nwalign3/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/nwalign3/README.html