:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'oligoarrayaux' .. highlight: bash oligoarrayaux ============= .. conda:recipe:: oligoarrayaux :replaces_section_title: :noindex: OligoArrayAux is a subset of the UNAFold package for use with OligoArray. :homepage: http://unafold.rna.albany.edu/?q=DINAMelt/OligoArrayAux :license: ACADEMIC NON-COMMERCIAL USE LICENSE :recipe: /`oligoarrayaux `_/`meta.yaml `_ :links: doi: :doi:`10.1007/978-1-60327-429-6_1` .. conda:package:: oligoarrayaux |downloads_oligoarrayaux| |docker_oligoarrayaux| :versions: ``3.8-0`` :depends libgcc-ng: ``>=7.3.0`` :depends libstdcxx-ng: ``>=7.3.0`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install oligoarrayaux and update with:: mamba update oligoarrayaux To create a new environment, run:: mamba create --name myenvname oligoarrayaux with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/oligoarrayaux: (see `oligoarrayaux/tags`_ for valid values for ````) .. |downloads_oligoarrayaux| image:: https://img.shields.io/conda/dn/bioconda/oligoarrayaux.svg?style=flat :target: https://anaconda.org/bioconda/oligoarrayaux :alt: (downloads) .. |docker_oligoarrayaux| image:: https://quay.io/repository/biocontainers/oligoarrayaux/status :target: https://quay.io/repository/biocontainers/oligoarrayaux .. _`oligoarrayaux/tags`: https://quay.io/repository/biocontainers/oligoarrayaux?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/oligoarrayaux/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/oligoarrayaux/README.html