:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pb-falcon' .. highlight: bash pb-falcon ========= .. conda:recipe:: pb-falcon :replaces_section_title: :noindex: FALCON\/Unzip tool\-suite \(originally by Jason Chin\) :homepage: https://github.com/PacificBiosciences/pbbioconda :license: BSD 3-Clause Clear License :recipe: /`pb-falcon `_/`meta.yaml `_ .. conda:package:: pb-falcon |downloads_pb-falcon| |docker_pb-falcon| :versions: .. raw:: html
2.2.4-42.2.4-32.2.4-22.2.4-12.2.4-02.2.3-02.2.2-02.2.1-02.2.0-1 ``2.2.4-4``,  ``2.2.4-3``,  ``2.2.4-2``,  ``2.2.4-1``,  ``2.2.4-0``,  ``2.2.3-0``,  ``2.2.2-0``,  ``2.2.1-0``,  ``2.2.0-1``,  ``2.2.0-0``,  ``0.3.4-0``,  ``0.3.3-0``,  ``0.3.2-0``,  ``0.3.1-0``,  ``0.3.0-1``,  ``0.3.0-0``,  ``0.2.7-1``,  ``0.2.6-3``,  ``0.2.6-2``,  ``0.2.6-1``,  ``0.2.5-3``,  ``0.2.5-2``,  ``0.2.5-1``,  ``0.2.4-0``,  ``0.2.3-0``,  ``0.2.2-0``,  ``0.2.1-1``,  ``0.2.1-0``,  ``0.2.0-2``,  ``0.2.0-0``,  ``0.0.2-0``,  ``0.0.1-0``,  ``0.0.0-0`` .. raw:: html
:depends future: ``>=0.16.0`` :depends htslib: ``>=1.17,<1.20.0a0`` :depends libgcc-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends networkx: ``>=1.9.1`` :depends numpy: :depends pysam: :depends python: ``>=3.10,<3.11.0a0`` :depends python-edlib: ``>=1.2.4`` :depends python-intervaltree: :depends python-msgpack: ``>=0.6.1`` :depends python_abi: ``3.10.* *_cp310`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pb-falcon and update with:: mamba update pb-falcon To create a new environment, run:: mamba create --name myenvname pb-falcon with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pb-falcon: (see `pb-falcon/tags`_ for valid values for ````) .. |downloads_pb-falcon| image:: https://img.shields.io/conda/dn/bioconda/pb-falcon.svg?style=flat :target: https://anaconda.org/bioconda/pb-falcon :alt: (downloads) .. |docker_pb-falcon| image:: https://quay.io/repository/biocontainers/pb-falcon/status :target: https://quay.io/repository/biocontainers/pb-falcon .. _`pb-falcon/tags`: https://quay.io/repository/biocontainers/pb-falcon?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pb-falcon/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pb-falcon/README.html