:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'perl-sanger-cgp-battenberg' .. highlight: bash perl-sanger-cgp-battenberg ========================== .. conda:recipe:: perl-sanger-cgp-battenberg :replaces_section_title: :noindex: detect subclonality and copy number in matched NGS data :homepage: https://github.com/cancerit/cgpBattenberg :license: GPLv3 :recipe: /`perl-sanger-cgp-battenberg `_/`meta.yaml `_ .. conda:package:: perl-sanger-cgp-battenberg |downloads_perl-sanger-cgp-battenberg| |docker_perl-sanger-cgp-battenberg| :versions: ``1.4.1-8``,  ``1.4.1-7``,  ``1.4.1-6``,  ``1.4.1-5``,  ``1.4.1-4``,  ``1.4.1-3``,  ``1.4.1-2``,  ``1.4.1-1`` :depends cancerit-allelecount: :depends impute2: :depends libgcc-ng: ``>=10.3.0`` :depends perl: ``>=5.32.1,<5.33.0a0 *_perl5`` :depends perl-file-sharedir: :depends perl-file-sharedir-install: :depends perl-pcap: :depends perl-sanger-cgp-allelecount: :requirements: .. rubric:: Installation With an activated Bioconda channel (see :ref:`set-up-channels`), install with:: conda install perl-sanger-cgp-battenberg and update with:: conda update perl-sanger-cgp-battenberg or use the docker container:: docker pull quay.io/biocontainers/perl-sanger-cgp-battenberg: (see `perl-sanger-cgp-battenberg/tags`_ for valid values for ````) .. |downloads_perl-sanger-cgp-battenberg| image:: https://img.shields.io/conda/dn/bioconda/perl-sanger-cgp-battenberg.svg?style=flat :target: https://anaconda.org/bioconda/perl-sanger-cgp-battenberg :alt: (downloads) .. |docker_perl-sanger-cgp-battenberg| image:: https://quay.io/repository/biocontainers/perl-sanger-cgp-battenberg/status :target: https://quay.io/repository/biocontainers/perl-sanger-cgp-battenberg .. _`perl-sanger-cgp-battenberg/tags`: https://quay.io/repository/biocontainers/perl-sanger-cgp-battenberg?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/perl-sanger-cgp-battenberg/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/perl-sanger-cgp-battenberg/README.html