:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'piler-cr' .. highlight: bash piler-cr ======== .. conda:recipe:: piler-cr :replaces_section_title: :noindex: Identification and analysis of CRISPR repeats. :homepage: http://www.drive5.com/pilercr/ :license: Public Domain :recipe: /`piler-cr `_/`meta.yaml `_ .. conda:package:: piler-cr |downloads_piler-cr| |docker_piler-cr| :versions: ``1.06-4``,  ``1.06-3``,  ``1.06-2``,  ``1.06-1``,  ``1.06-0`` :depends libgcc-ng: ``>=12`` :depends libstdcxx-ng: ``>=12`` :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install piler-cr and update with:: mamba update piler-cr To create a new environment, run:: mamba create --name myenvname piler-cr with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/piler-cr: (see `piler-cr/tags`_ for valid values for ````) .. |downloads_piler-cr| image:: https://img.shields.io/conda/dn/bioconda/piler-cr.svg?style=flat :target: https://anaconda.org/bioconda/piler-cr :alt: (downloads) .. |docker_piler-cr| image:: https://quay.io/repository/biocontainers/piler-cr/status :target: https://quay.io/repository/biocontainers/piler-cr .. _`piler-cr/tags`: https://quay.io/repository/biocontainers/piler-cr?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/piler-cr/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/piler-cr/README.html