:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'plasmar'
.. highlight: bash

plasmar
=======

.. conda:recipe:: plasmar
   :replaces_section_title:
   :noindex:

   Plasmid Like Assembly Sequence Matching Algorithm for Resistance \(PLASMAR\)

   :homepage: https://https://github.com/rastanton/PLASMAR
   :license: APACHE / Apache License 2.0
   :recipe: /`plasmar <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/plasmar>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/plasmar/meta.yaml>`_

   


.. conda:package:: plasmar

   |downloads_plasmar| |docker_plasmar|

   :versions:
      
      

      ``1.4-0``

      

   
   :depends entrez-direct: 
   :depends gamma: 
   :depends matplotlib-base: ``3.10.6.*``
   :depends numpy: ``>=1.25``
   :depends python: ``>=3.11``
   :depends scikit-learn: ``1.6.1.*``
   :requirements:

   :additional platforms:
      

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install plasmar

   and update with::

      mamba update plasmar

  To create a new environment, run::

      mamba create --name myenvname plasmar

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/plasmar:<tag>

   (see `plasmar/tags`_ for valid values for ``<tag>``)


.. |downloads_plasmar| image:: https://img.shields.io/conda/dn/bioconda/plasmar.svg?style=flat
   :target: https://anaconda.org/bioconda/plasmar
   :alt:   (downloads)
.. |docker_plasmar| image:: https://quay.io/repository/biocontainers/plasmar/status
   :target: https://quay.io/repository/biocontainers/plasmar
.. _`plasmar/tags`: https://quay.io/repository/biocontainers/plasmar?tab=tags


.. raw:: html

    <script>
        var package = "plasmar";
        var versions = ["1.4"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

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