:orphan:  .. only available via index, not via toctree

.. title:: Package Recipe 'prank'
.. highlight: bash

prank
=====

.. conda:recipe:: prank
   :replaces_section_title:
   :noindex:

   PRANK is a probabilistic multiple alignment program for DNA\, codon and amino\-acid sequences.

   :homepage: http://wasabiapp.org/software/prank/
   :license: GPL3 / GPL-3.0-or-later
   :recipe: /`prank <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/prank>`_/`meta.yaml <https://github.com/bioconda/bioconda-recipes/tree/master/recipes/prank/meta.yaml>`_
   :links: biotools: :biotools:`prank`, doi: :doi:`10.1007/978-1-62703-646-7_10`

   


.. conda:package:: prank

   |downloads_prank| |docker_prank|

   :versions:
      
      
      .. raw:: html

         <details><summary><span class="truncated-version-list"><code>170427-0</code>,  <code>v.170427-7</code>,  <code>v.170427-6</code>,  <code>v.170427-5</code>,  <code>v.170427-4</code>,  <code>v.170427-3</code>,  <code>v.170427-2</code>,  <code>v.170427-1</code>,  <code>v.170427-0</code>,  </span></summary>
      

      ``170427-0``,  ``v.170427-7``,  ``v.170427-6``,  ``v.170427-5``,  ``v.170427-4``,  ``v.170427-3``,  ``v.170427-2``,  ``v.170427-1``,  ``v.170427-0``,  ``v.150803-0``

      
      .. raw:: html

         </details>
      

   
   :depends libgcc-ng: ``>=12``
   :depends libstdcxx-ng: ``>=12``
   :requirements:

   .. rubric:: Installation

  You need a conda-compatible package manager
  (currently either `micromamba <https://mamba.readthedocs.io>`_, `mamba <https://mamba.readthedocs.io>`_, or `conda <https://docs.conda.io/projects/conda>`_)
  and the Bioconda channel already activated (see :ref:`set-up-channels`).

  While any of above package managers is fine, it is currently recommended to use either
  micromamba or mamba (see `here <https://mamba.readthedocs.io>`_ for installation instructions).
  We will show all commands using mamba below, but the arguments are the same for the two
  others.

  Given that you already have a conda environment in which you want to have this package, install with::

      mamba install prank

   and update with::

      mamba update prank

  To create a new environment, run::

      mamba create --name myenvname prank

  with ``myenvname`` being a reasonable name for the environment
  (see e.g. the `mamba docs <https://mamba.readthedocs.io>`_ for details and further options).

  Alternatively, use the docker container::

      docker pull quay.io/biocontainers/prank:<tag>

   (see `prank/tags`_ for valid values for ``<tag>``)


.. |downloads_prank| image:: https://img.shields.io/conda/dn/bioconda/prank.svg?style=flat
   :target: https://anaconda.org/bioconda/prank
   :alt:   (downloads)
.. |docker_prank| image:: https://quay.io/repository/biocontainers/prank/status
   :target: https://quay.io/repository/biocontainers/prank
.. _`prank/tags`: https://quay.io/repository/biocontainers/prank?tab=tags


.. raw:: html

    <script>
        var package = "prank";
        var versions = ["170427","v.170427","v.170427","v.170427","v.170427"];
    </script>






Download stats
-----------------

.. raw:: html
    :file: ../../templates/package_dashboard.html

Link to this page
-----------------

Render an |install-with-bioconda| badge with the following MarkDown::

   [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/prank/README.html)

.. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat
   :target: http://bioconda.github.io/recipes/prank/README.html