:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pybigwig' .. highlight: bash pybigwig ======== .. conda:recipe:: pybigwig :replaces_section_title: :noindex: A python extension written in C for quick access to bigWig files. :homepage: https://github.com/dpryan79/pyBigWig :license: MIT / MIT :recipe: /`pybigwig `_/`meta.yaml `_ .. conda:package:: pybigwig |downloads_pybigwig| |docker_pybigwig| :versions: .. raw:: html
0.3.22-20.3.22-10.3.22-00.3.18-30.3.18-20.3.18-10.3.18-00.3.17-20.3.17-1 ``0.3.22-2``,  ``0.3.22-1``,  ``0.3.22-0``,  ``0.3.18-3``,  ``0.3.18-2``,  ``0.3.18-1``,  ``0.3.18-0``,  ``0.3.17-2``,  ``0.3.17-1``,  ``0.3.17-0``,  ``0.3.16-0``,  ``0.3.15-0``,  ``0.3.14-0``,  ``0.3.13-2``,  ``0.3.13-1``,  ``0.3.13-0``,  ``0.3.12-2``,  ``0.3.12-1``,  ``0.3.12-0``,  ``0.3.11-2``,  ``0.3.11-1``,  ``0.3.11-0``,  ``0.3.10-0``,  ``0.3.9-0``,  ``0.3.8-0``,  ``0.3.7-0``,  ``0.3.6-1``,  ``0.3.6-0``,  ``0.3.5-0``,  ``0.3.4-0``,  ``0.3.3-0``,  ``0.2.8-0``,  ``0.2.7-0``,  ``0.2.6-0``,  ``0.2.5-0``,  ``0.2.4-0``,  ``0.2.3-0``,  ``0.2.1b-1``,  ``0.2.1b-0``,  ``0.1.11-1``,  ``0.1.11-0`` .. raw:: html
:depends libcurl: ``>=8.6.0,<9.0a0`` :depends libgcc-ng: ``>=12`` :depends libzlib: ``>=1.2.13,<1.3.0a0`` :depends numpy: ``>=1.21.6,<2.0a0`` :depends python: ``>=3.10,<3.11.0a0`` :depends python_abi: ``3.10.* *_cp310`` :depends zlib: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pybigwig and update with:: mamba update pybigwig To create a new environment, run:: mamba create --name myenvname pybigwig with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pybigwig: (see `pybigwig/tags`_ for valid values for ````) .. |downloads_pybigwig| image:: https://img.shields.io/conda/dn/bioconda/pybigwig.svg?style=flat :target: https://anaconda.org/bioconda/pybigwig :alt: (downloads) .. |docker_pybigwig| image:: https://quay.io/repository/biocontainers/pybigwig/status :target: https://quay.io/repository/biocontainers/pybigwig .. _`pybigwig/tags`: https://quay.io/repository/biocontainers/pybigwig?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pybigwig/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pybigwig/README.html