:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pymix' .. highlight: bash pymix ===== .. conda:recipe:: pymix :replaces_section_title: :noindex: Python mixture package :homepage: http://www.pymix.org/pymix :license: GPL2 :recipe: /`pymix `_/`meta.yaml `_ .. conda:package:: pymix |downloads_pymix| |docker_pymix| :versions: ``0.8-1``,  ``0.8-0`` :depends ghmm: :depends glib: :depends gsl: ``>=2.2.1,<2.3.0a0`` :depends libgcc-ng: ``>=4.9`` :depends matplotlib: ``>=1.1.0,!=1.4.2,<1.5.0`` :depends numpy: :depends python: ``>=2.7,<2.8.0a0`` :depends xorg-libsm: :depends xorg-libxau: :depends xorg-libxdmcp: :depends xorg-libxext: :depends xorg-libxrender: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pymix and update with:: mamba update pymix To create a new environment, run:: mamba create --name myenvname pymix with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pymix: (see `pymix/tags`_ for valid values for ````) .. |downloads_pymix| image:: https://img.shields.io/conda/dn/bioconda/pymix.svg?style=flat :target: https://anaconda.org/bioconda/pymix :alt: (downloads) .. |docker_pymix| image:: https://quay.io/repository/biocontainers/pymix/status :target: https://quay.io/repository/biocontainers/pymix .. _`pymix/tags`: https://quay.io/repository/biocontainers/pymix?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pymix/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pymix/README.html