:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'pyranges' .. highlight: bash pyranges ======== .. conda:recipe:: pyranges :replaces_section_title: :noindex: GenomicRanges for Python. :homepage: http://github.com/endrebak/pyranges :license: MIT / MIT :recipe: /`pyranges `_/`meta.yaml `_ .. conda:package:: pyranges |downloads_pyranges| |docker_pyranges| :versions: .. raw:: html
0.0.129-00.0.128-00.0.127-00.0.125-00.0.124-00.0.120-00.0.117-00.0.115-00.0.113-0 ``0.0.129-0``,  ``0.0.128-0``,  ``0.0.127-0``,  ``0.0.125-0``,  ``0.0.124-0``,  ``0.0.120-0``,  ``0.0.117-0``,  ``0.0.115-0``,  ``0.0.113-0``,  ``0.0.112-0``,  ``0.0.111-0``,  ``0.0.110-0``,  ``0.0.109-0``,  ``0.0.108-0``,  ``0.0.104-0``,  ``0.0.103-0``,  ``0.0.101-0``,  ``0.0.100-0``,  ``0.0.99-0``,  ``0.0.98-0``,  ``0.0.97-0``,  ``0.0.96-0``,  ``0.0.95-0``,  ``0.0.94-0``,  ``0.0.93-0``,  ``0.0.92-0``,  ``0.0.89-0``,  ``0.0.88-0``,  ``0.0.87-0``,  ``0.0.86-0``,  ``0.0.85-0``,  ``0.0.84-0``,  ``0.0.83-0``,  ``0.0.81-0``,  ``0.0.80-0``,  ``0.0.79-1``,  ``0.0.79-0``,  ``0.0.78-0``,  ``0.0.77-0``,  ``0.0.76-0``,  ``0.0.75-0``,  ``0.0.74-0``,  ``0.0.73-0``,  ``0.0.72-0``,  ``0.0.71-0``,  ``0.0.70-0``,  ``0.0.69-0``,  ``0.0.67-0``,  ``0.0.66-0``,  ``0.0.65-0``,  ``0.0.64-0``,  ``0.0.63-0``,  ``0.0.62-0``,  ``0.0.61-0``,  ``0.0.60-0``,  ``0.0.59-0``,  ``0.0.58-0``,  ``0.0.57-0``,  ``0.0.56-0``,  ``0.0.55-0``,  ``0.0.54-0``,  ``0.0.53-0``,  ``0.0.52-0``,  ``0.0.51-1``,  ``0.0.51-0``,  ``0.0.50-0``,  ``0.0.49-0``,  ``0.0.48-0``,  ``0.0.45-0``,  ``0.0.44-0``,  ``0.0.43-0``,  ``0.0.42-0``,  ``0.0.41-0``,  ``0.0.40-0``,  ``0.0.39-0`` .. raw:: html
:depends natsort: :depends ncls: ``>=0.0.63`` :depends pandas: :depends pyrle: :depends python: :depends sorted_nearest: ``>=0.0.33`` :depends tabulate: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install pyranges and update with:: mamba update pyranges To create a new environment, run:: mamba create --name myenvname pyranges with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/pyranges: (see `pyranges/tags`_ for valid values for ````) .. |downloads_pyranges| image:: https://img.shields.io/conda/dn/bioconda/pyranges.svg?style=flat :target: https://anaconda.org/bioconda/pyranges :alt: (downloads) .. |docker_pyranges| image:: https://quay.io/repository/biocontainers/pyranges/status :target: https://quay.io/repository/biocontainers/pyranges .. _`pyranges/tags`: https://quay.io/repository/biocontainers/pyranges?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pyranges/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/pyranges/README.html