:orphan: .. only available via index, not via toctree .. title:: Package Recipe 'quasildr' .. highlight: bash quasildr ======== .. conda:recipe:: quasildr :replaces_section_title: :noindex: Quasilinear data representations for single\-cell omics data analysis. :homepage: https://github.com/jzthree/quasildr :license: BSD 3-clause clear :recipe: /`quasildr `_/`meta.yaml `_ .. conda:package:: quasildr |downloads_quasildr| |docker_quasildr| :versions: ``0.2.2-0``,  ``0.2.1-0`` :depends docopt: :depends multiprocess: :depends nmslib: :depends numpy: :depends pandas: :depends plotly: :depends plotnine: :depends pynndescent: :depends python: ``>=3.6`` :depends scikit-learn: :depends scipy: :depends seaborn: :depends statsmodels: :requirements: .. rubric:: Installation You need a conda-compatible package manager (currently either `micromamba `_, `mamba `_, or `conda `_) and the Bioconda channel already activated (see :ref:`set-up-channels`). While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see `here `_ for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others. Given that you already have a conda environment in which you want to have this package, install with:: mamba install quasildr and update with:: mamba update quasildr To create a new environment, run:: mamba create --name myenvname quasildr with ``myenvname`` being a reasonable name for the environment (see e.g. the `mamba docs `_ for details and further options). Alternatively, use the docker container:: docker pull quay.io/biocontainers/quasildr: (see `quasildr/tags`_ for valid values for ````) .. |downloads_quasildr| image:: https://img.shields.io/conda/dn/bioconda/quasildr.svg?style=flat :target: https://anaconda.org/bioconda/quasildr :alt: (downloads) .. |docker_quasildr| image:: https://quay.io/repository/biocontainers/quasildr/status :target: https://quay.io/repository/biocontainers/quasildr .. _`quasildr/tags`: https://quay.io/repository/biocontainers/quasildr?tab=tags .. raw:: html Download stats ----------------- .. raw:: html :file: ../../templates/package_dashboard.html Link to this page ----------------- Render an |install-with-bioconda| badge with the following MarkDown:: [![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/quasildr/README.html) .. |install-with-bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat :target: http://bioconda.github.io/recipes/quasildr/README.html